RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 A0A0G2JLW4 131 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 SMCO2A6NFE2 343 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 ZNF165P49910 485 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 WNK3Q9BYP7 1800 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 MYL1P05976 194 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 FGRP09769 529 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 CNGA1P29973 690 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 GNPTABQ3T906 1256 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 FAM114A1Q8IWE2 563 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 TRIML1Q8N9V2 468 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 UBA5Q9GZZ9 404 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 PNMA6FA0A0J9YX94 578 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 LONP1P36776 959 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 AP3B2Q13367 1082 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 TXNRD3Q86VQ6 643 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 FBXO11Q86XK2 927 aa9.65□□□□□ -0.86
PDLIM5-201ENST00000317968 ANKRD62A6NC57 917 aa9.65□□□□□ -0.87
PDLIM5-201ENST00000317968 TCP10L2B9ZVM9 353 aa9.65□□□□□ -0.87
PDLIM5-201ENST00000317968 DACT2Q5SW24 774 aa9.65□□□□□ -0.87
PDLIM5-201ENST00000317968 AP5M1Q9H0R1 490 aa9.65□□□□□ -0.87
PDLIM5-201ENST00000317968 HACL1Q9UJ83 578 aa9.65□□□□□ -0.87
PDLIM5-201ENST00000317968 ESYT2A0FGR8 921 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 PNMA8AQ86V59 439 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 ZNF579Q8NAF0 562 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 ZNF277Q9NRM2 450 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 SLC26A4O43511 780 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 KLRK1P26718 216 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 NEK8Q86SG6 692 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 MTMR4Q9NYA4 1195 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 ANKRD36CQ5JPF3 1778 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 RASA1P20936 1047 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 STAT6P42226 847 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 KCTD2Q14681 263 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 RRAGBQ5VZM2 374 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 VPS36Q86VN1 386 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 SAMD3Q8N6K7 520 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 RNF214Q8ND24 703 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 USP28Q96RU2 1077 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 FERMT1Q9BQL6 677 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 VPS54Q9P1Q0 977 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 KRT26Q7Z3Y9 468 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 DYNLL2Q96FJ2 89 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 NT5C3AQ9H0P0 336 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 DEF6Q9H4E7 631 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 HS1BP3Q53T59 392 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 SPOUT1Q5T280 376 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 DPP9Q86TI2 863 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 ZNF397Q8NF99 534 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 PAGR1Q9BTK6 254 aa9.64□□□□□ -0.87
PDLIM5-201ENST00000317968 LMNB1P20700 586 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 RSPH3Q86UC2 560 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 LPAR1Q92633 364 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 TDRD3Q9H7E2 651 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 KDM3AQ9Y4C1 1321 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 CYP2D7A0A087X1C5 515 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 FKBP15Q5T1M5 1219 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 PIK3AP1Q6ZUJ8 805 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 SLFN12Q8IYM2 578 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 LINC00301Q8NCQ3 95 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 ZNF70Q9UC06 446 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 BTBD18B2RXH4 712 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 CYP2D6P10635 497 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 COPB2P35606 906 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 CTAGE1Q96RT6 745 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 PSTPIP2Q9H939 334 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 ROBO3Q96MS0 1386 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 SEC23AQ15436 765 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 PPFIBP1Q86W92 1011 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 MLKLQ8NB16 471 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 IMPG2Q9BZV3 1241 aa9.63□□□□□ -0.87
PDLIM5-201ENST00000317968 GSDMDP57764 484 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 TYRO3Q06418 890 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 SEPT11Q9NVA2 429 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 SERPINC1P01008 464 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 VIL1P09327 827 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 PDILTQ8N807 584 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 COA7Q96BR5 231 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 MARCKSP29966 332 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 TROAPQ12815 778 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 KCTD17Q8N5Z5 321 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 FEM1BQ9UK73 627 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 SHANK3Q9BYB0 1731 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 LTBP3Q9NS15 1303 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.872e-9■■■■■ 29.5
PDLIM5-201ENST00000317968 ODR4Q5SWX8 454 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 CEP95Q96GE4 821 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 KCNJ14Q9UNX9 436 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 ZBTB5O15062 677 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 SYDE2Q5VT97 1194 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 PCDHA1Q9Y5I3 950 aa9.62□□□□□ -0.87
PDLIM5-201ENST00000317968 PSMD14O00487 310 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 PSMA7O14818 248 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 LRRC47Q8N1G4 583 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms