RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 IQCA1Q86XH1 822 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 SUGP1Q8IWZ8 645 aaKnown RBP11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 TTLL6Q8N841 843 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 JRKLQ9Y4A0 524 aa11.69□□□□□ -0.54
APOBEC3F-201ENST00000308521 PPIP5K2O43314 1243 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 CUTAO60888 179 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 TBC1D8O95759 1140 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 SATB1Q01826 763 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 SBK1Q52WX2 424 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 PODNQ7Z5L7 613 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 SRLQ86TD4 932 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 DDX4Q9NQI0 724 aaKnown RBP11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZNF277Q9NRM2 450 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 FLT1P17948 1338 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 RGPD3A6NKT7 1758 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 CDKL5O76039 1030 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 FGRP09769 529 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 MARCKSP29966 332 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 IARSP41252 1262 aaKnown RBP11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 RTN1Q16799 776 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 JAKMIP3Q5VZ66 844 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 CNPY4Q8N129 248 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 FANCBQ8NB91 859 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 RABGGTAQ92696 567 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 ALG1Q9BT22 464 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 USP40Q9NVE5 1235 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 MRFAP1Q9Y605 127 aa11.68□□□□□ -0.54
APOBEC3F-201ENST00000308521 ATP2B1P20020 1258 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 ISM2Q6H9L7 571 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 KRBA2Q6ZNG9 492 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 BAG1Q99933 345 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 IL17RBQ9NRM6 502 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 FANCLQ9NW38 375 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 YDJCA8MPS7 323 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 TMEM232C9JQI7 657 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 GAKO14976 1311 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 IVLP07476 585 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 TCP10Q12799 353 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 NFIAQ12857 509 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 PNOCQ13519 176 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZSCAN26Q16670 478 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 METTL16Q86W50 562 aaKnown RBP11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZFPM1Q8IX07 1006 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 MED4Q9NPJ6 270 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 INTS13Q9NVM9 706 aa11.67□□□□□ -0.54
APOBEC3F-201ENST00000308521 ORC4O43929 436 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 ABCB7O75027 752 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 RAD17O75943 681 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 SEC31AO94979 1220 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 MAGEA9P43362 315 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 GSCP56915 257 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 PPP2R3AQ06190 1150 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 SLF2Q8IX21 1173 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZNF444Q8N0Y2 327 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 KIFC2Q96AC6 838 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 KCNG1Q9UIX4 513 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 SCN9AQ15858 1988 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 TIAM2Q8IVF5 1701 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 SASH3O75995 380 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 GNG11P61952 73 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 SSRP1Q08945 709 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 TTC31Q49AM3 519 aaPredicted RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 DACT2Q5SW24 774 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 KRT40Q6A162 431 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 CPLX2Q6PUV4 134 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 TMTC2Q8N394 836 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 ARFGAP3Q9NP61 516 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 STX8Q9UNK0 236 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 KCNJ14Q9UNX9 436 aa11.66□□□□□ -0.54
APOBEC3F-201ENST00000308521 TSPY3P0CV98 308 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 TSPY8P0CW00 308 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 OAS2P29728 719 aaKnown RBP11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 CRKP46108 304 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 CDK8P49336 464 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 SMC1AQ14683 1233 aaKnown RBP11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 NBPF20Q3BBV1 942 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 RCSD1Q6JBY9 416 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 HOMEZQ8IX15 550 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 TC2NQ8N9U0 490 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 CNNM3Q8NE01 707 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 TEKT1Q969V4 418 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 POLR3GO15318 223 aaPredicted RBP11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 PLCG2P16885 1265 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 ZNF18P17022 549 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 TROAPQ12815 778 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 BRD3Q15059 726 aa11.65□□□□□ -0.54
APOBEC3F-201ENST00000308521 LONRF3Q496Y0 759 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms