RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 SMARCAL1Q9NZC9 954 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 CNTNAP5Q8WYK1 1306 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 PRPF3O43395 683 aaKnown RBP15.25■□□□□ 0.03
CTTN-201ENST00000301843 ATP6V1AP38606 617 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 ATP2C1P98194 919 aaPredicted RBP15.25■□□□□ 0.03
CTTN-201ENST00000301843 CCDC122Q5T0U0 273 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 TYW1BQ6NUM6 668 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 CYP26C1Q6V0L0 522 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 CTCFLQ8NI51 663 aaPredicted RBP15.25■□□□□ 0.03
CTTN-201ENST00000301843 LRRC15Q8TF66 581 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 TNFRSF25Q93038 417 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 POLD4Q9HCU8 107 aa15.25■□□□□ 0.03
CTTN-201ENST00000301843 NDUFA10O95299 355 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 GOLGA8HP0CJ92 632 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 MATR3P43243 847 aaKnown RBP eCLIP15.24■□□□□ 0.03
CTTN-201ENST00000301843 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 FERMT2Q96AC1 680 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 LACRTQ9GZZ8 138 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 RTL9Q8NET4 1388 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 PRDX5P30044 214 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 CCDC152Q4G0S7 254 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 KRT26Q7Z3Y9 468 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 TMTC1Q8IUR5 882 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 DYNLL2Q96FJ2 89 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 TRIM47Q96LD4 638 aa15.24■□□□□ 0.03
CTTN-201ENST00000301843 TTF2Q9UNY4 1162 aaKnown RBP15.24■□□□□ 0.03
CTTN-201ENST00000301843 DOCK2Q92608 1830 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 TSPY2A6NKD2 308 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 TULP2O00295 520 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 ATP8B1O43520 1251 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 DNA2P51530 1060 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 INF2Q27J81 1249 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 ELOA2Q8IYF1 753 aaPredicted RBP15.23■□□□□ 0.03
CTTN-201ENST00000301843 NAA15Q9BXJ9 866 aaKnown RBP15.23■□□□□ 0.03
CTTN-201ENST00000301843 MYBL2P10244 700 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 CRKLP46109 303 aaKnown RBP15.23■□□□□ 0.03
CTTN-201ENST00000301843 EIF5P55010 431 aaKnown RBP15.23■□□□□ 0.03
CTTN-201ENST00000301843 ATP2B2Q01814 1243 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 RSPH14Q9UHP6 348 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 COL1A1P02452 1464 aaPredicted RBP15.23■□□□□ 0.03
CTTN-201ENST00000301843 PLEKP08567 350 aaPredicted RBP15.23■□□□□ 0.03
CTTN-201ENST00000301843 USP17L8P0C7I0 530 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 SCG2P13521 617 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 HERVK_113P62684 666 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 KIAA1328Q86T90 577 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 FAM204AQ9H8W3 233 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 EHD2Q9NZN4 543 aa15.23■□□□□ 0.03
CTTN-201ENST00000301843 MYO1CO00159 1063 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 ERLIN1O75477 346 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 DOT1LQ8TEK3 1739 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 LIMA1Q9UHB6 759 aaKnown RBP15.22■□□□□ 0.03
CTTN-201ENST00000301843 C2orf54Q08AI8 447 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
CTTN-201ENST00000301843 WDR59Q6PJI9 974 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 MSANTD4Q8NCY6 345 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 CAGE1Q8TC20 777 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 RWDD2AQ9UIY3 292 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 WNK3Q9BYP7 1800 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 MYH13Q9UKX3 1938 aa15.22■□□□□ 0.03
CTTN-201ENST00000301843 CXCR5P32302 372 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 EZH2Q15910 746 aaKnown RBP15.21■□□□□ 0.03
CTTN-201ENST00000301843 ERFEQ4G0M1 354 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 HSP90B2PQ58FF3 399 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 CCDC178Q5BJE1 867 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
CTTN-201ENST00000301843 ANKRD20A12PQ8NF67 263 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 CELF1Q92879 486 aaKnown RBP15.21■□□□□ 0.03
CTTN-201ENST00000301843 RAB21Q9UL25 225 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 LUC7L2Q9Y383 392 aaKnown RBP15.21■□□□□ 0.03
CTTN-201ENST00000301843 USP17L3A6NCW0 530 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 USP17L4A6NCW7 530 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 GTPBP6O43824 516 aaPredicted RBP15.21■□□□□ 0.03
CTTN-201ENST00000301843 TRIM21P19474 475 aaKnown RBP15.21■□□□□ 0.03
CTTN-201ENST00000301843 ZNF658Q5TYW1 1059 aaPredicted RBP15.21■□□□□ 0.03
CTTN-201ENST00000301843 USP17L1Q7RTZ2 530 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 HEATR3Q7Z4Q2 680 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 EXOC4Q96A65 974 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 JADE2Q9NQC1 790 aa15.21■□□□□ 0.03
CTTN-201ENST00000301843 PDE2AO00408 941 aaPredicted RBP15.21■□□□□ 0.02
CTTN-201ENST00000301843 ZPR1O75312 459 aa15.21■□□□□ 0.02
CTTN-201ENST00000301843 ACTN2P35609 894 aa15.21■□□□□ 0.02
CTTN-201ENST00000301843 AMPD2Q01433 879 aa15.21■□□□□ 0.02
CTTN-201ENST00000301843 NAALADL2Q58DX5 795 aa15.21■□□□□ 0.02
CTTN-201ENST00000301843 LEKR1Q6ZMV7 388 aa15.21■□□□□ 0.02
CTTN-201ENST00000301843 COL16A1Q07092 1604 aaPredicted RBP15.21■□□□□ 0.02
CTTN-201ENST00000301843 FCER1AP12319 257 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 MECOMQ03112 1051 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 DNAJC21Q5F1R6 531 aaKnown RBP15.2■□□□□ 0.02
CTTN-201ENST00000301843 MB21D1Q8N884 522 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 CCDC87Q9NVE4 849 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 MCM9Q9NXL9 1143 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 TIAM2Q8IVF5 1701 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 FAM170AA1A519 330 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 ITPK1Q13572 414 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 OR8K1Q8NGG5 319 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 EHD4Q9H223 541 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 VAT1LQ9HCJ6 419 aa15.2■□□□□ 0.02
CTTN-201ENST00000301843 RRP15Q9Y3B9 282 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms