RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 MTMR10Q9NXD2 777 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 DDX20Q9UHI6 824 aaKnown RBP11.26□□□□□ -0.61
CNOT9-202ENST00000295701 ZNF532Q9HCE3 1301 aa11.26□□□□□ -0.61
CNOT9-202ENST00000295701 COL11A1P12107 1806 aaPredicted RBP11.25□□□□□ -0.61
CNOT9-202ENST00000295701 COBLO75128 1261 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 GLRX3O76003 335 aaKnown RBP11.25□□□□□ -0.61
CNOT9-202ENST00000295701 IGHA2P01877 340 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 COG2Q14746 738 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 GJC2Q5T442 439 aaPredicted RBP11.25□□□□□ -0.61
CNOT9-202ENST00000295701 CERS3Q8IU89 383 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 SIAH1Q8IUQ4 282 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 DNAJC2Q99543 621 aaKnown RBP11.25□□□□□ -0.61
CNOT9-202ENST00000295701 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 DCP1AQ9NPI6 582 aaPredicted RBP11.25□□□□□ -0.61
CNOT9-202ENST00000295701 IVNS1ABPQ9Y6Y0 642 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 PARP14Q460N5 1801 aa11.25□□□□□ -0.61
CNOT9-202ENST00000295701 CYP2D7A0A087X1C5 515 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 HOXC6P09630 235 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 CYBAP13498 195 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 AKR1B1P15121 316 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 ERCC3P19447 782 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 ADORA2AP29274 412 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
CNOT9-202ENST00000295701 RTP1P59025 263 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 ERC1Q8IUD2 1116 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 SPICE1Q8N0Z3 855 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 LPAR1Q92633 364 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 TATDN2Q93075 761 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 CRNKL1Q9BZJ0 848 aaKnown RBP11.24□□□□□ -0.61
CNOT9-202ENST00000295701 TANGO6Q9C0B7 1094 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 SPATC1LQ9H0A9 340 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 BOLA2Q9H3K6 86 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 TSR3Q9UJK0 312 aaKnown RBP11.24□□□□□ -0.61
CNOT9-202ENST00000295701 UNC80Q8N2C7 3258 aa11.24□□□□□ -0.61
CNOT9-202ENST00000295701 C3orf80F5H4A9 247 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 PLS1Q14651 629 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 ATG4CQ96DT6 458 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 FAM161BQ96MY7 647 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 LTBP2Q14767 1821 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 MYH7P12883 1935 aa11.23□□□□□ -0.61
CNOT9-202ENST00000295701 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
CNOT9-202ENST00000295701 A0A0G2JMZ2 1700 aa11.22□□□□□ -0.61
CNOT9-202ENST00000295701 TTF1Q15361 905 aaPredicted RBP11.22□□□□□ -0.61
CNOT9-202ENST00000295701 NCAPG2Q86XI2 1143 aa11.22□□□□□ -0.61
CNOT9-202ENST00000295701 CLASRPQ8N2M8 674 aaKnown RBP11.22□□□□□ -0.61
CNOT9-202ENST00000295701 NPDC1Q9NQX5 325 aaPredicted RBP11.22□□□□□ -0.61
CNOT9-202ENST00000295701 FBXO28Q9NVF7 368 aa11.22□□□□□ -0.61
CNOT9-202ENST00000295701 PLXNA1Q9UIW2 1896 aa11.22□□□□□ -0.61
CNOT9-202ENST00000295701 ATP11BQ9Y2G3 1177 aa11.22□□□□□ -0.61
CNOT9-202ENST00000295701 STXBP5LQ9Y2K9 1186 aa11.22□□□□□ -0.61
CNOT9-202ENST00000295701 DNM1LO00429 736 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 FLOT1O75955 427 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 MBD4O95243 580 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 IFIT2P09913 472 aaKnown RBP11.21□□□□□ -0.61
CNOT9-202ENST00000295701 ADD2P35612 726 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 OLFML2BQ68BL8 750 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 SLC39A5Q6ZMH5 540 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 TMEM179Q6ZVK1 233 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 FERMT2Q96AC1 680 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 GUCD1Q96NT3 240 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
CNOT9-202ENST00000295701 COG6Q9Y2V7 657 aa11.21□□□□□ -0.61
CNOT9-202ENST00000295701 PRUNE2Q8WUY3 3088 aa11.21□□□□□ -0.62
CNOT9-202ENST00000295701 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.62
CNOT9-202ENST00000295701 USP17L12C9JPN9 530 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 USP17L21D6R901 530 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 STRNO43815 780 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 MSCO60682 206 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 ADCYAP1R1P41586 468 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 CDK8P49336 464 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 ICA1Q05084 483 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 TMEM132BQ14DG7 1078 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 SHHQ15465 462 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 HSP90AB4PQ58FF6 505 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 FAM47AQ5JRC9 791 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 C9orf50Q5SZB4 431 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
CNOT9-202ENST00000295701 NUDT18Q6ZVK8 323 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 STK11IPQ8N1F8 1099 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 SHCBP1Q8NEM2 672 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.2□□□□□ -0.62
CNOT9-202ENST00000295701 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 VCPKMTQ9H867 229 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 PAG1Q9NWQ8 432 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 TMX2Q9Y320 296 aa11.2□□□□□ -0.62
CNOT9-202ENST00000295701 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
CNOT9-202ENST00000295701 MYO9BQ13459 2157 aa11.19□□□□□ -0.62
CNOT9-202ENST00000295701 TRIM43BA6NCK2 446 aa11.19□□□□□ -0.62
CNOT9-202ENST00000295701 SEPT4O43236 478 aa11.19□□□□□ -0.62
CNOT9-202ENST00000295701 SMARCA5O60264 1052 aaPredicted RBP11.19□□□□□ -0.62
CNOT9-202ENST00000295701 PGK2P07205 417 aa11.19□□□□□ -0.62
CNOT9-202ENST00000295701 EEF2P13639 858 aaKnown RBP11.19□□□□□ -0.62
CNOT9-202ENST00000295701 TAL1P17542 331 aaPredicted RBP11.19□□□□□ -0.62
CNOT9-202ENST00000295701 LRRC41Q15345 812 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms