RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 REXO2Q9Y3B8 237 aaKnown RBP11.44□□□□□ -0.58
COPB1-201ENST00000249923 KLRC4O43908 158 aa11.44□□□□□ -0.58
COPB1-201ENST00000249923 CASQ1P31415 396 aa11.44□□□□□ -0.58
COPB1-201ENST00000249923 NLRP5P59047 1200 aa11.44□□□□□ -0.58
COPB1-201ENST00000249923 NFIXQ14938 502 aa11.44□□□□□ -0.58
COPB1-201ENST00000249923 WWC2Q6AWC2 1192 aa11.44□□□□□ -0.58
COPB1-201ENST00000249923 MCM9Q9NXL9 1143 aa11.44□□□□□ -0.58
COPB1-201ENST00000249923 LIMA1Q9UHB6 759 aaKnown RBP11.44□□□□□ -0.58
COPB1-201ENST00000249923 GTF2E1P29083 439 aaPredicted RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 C12orf60Q5U649 245 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 VPS16Q9H269 839 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 ATP8A2Q9NTI2 1148 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 PUF60Q9UHX1 559 aaKnown RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 TFR2Q9UP52 801 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 TSPY2A6NKD2 308 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 SEMA3EO15041 775 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 TFAP4Q01664 338 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 BMS1Q14692 1282 aaKnown RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 CC2D1AQ6P1N0 951 aaPredicted RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 CCDC102AQ96A19 550 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 ABHD10Q9NUJ1 306 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 ARPP21Q9UBL0 812 aaPredicted RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 PCDHA6Q9UN73 950 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 PCDHA8Q9Y5H6 950 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 TCP11X2Q5H9J9 407 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 FAM182BQ5T319 152 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 RRAGBQ5VZM2 374 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 PARD6BQ9BYG5 372 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 CRNKL1Q9BZJ0 848 aaKnown RBP11.43□□□□□ -0.58
COPB1-201ENST00000249923 ANKZF1Q9H8Y5 726 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 CALCOCO1Q9P1Z2 691 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 TRIM10Q9UDY6 481 aa11.43□□□□□ -0.58
COPB1-201ENST00000249923 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 ROBO3Q96MS0 1386 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 RPN1P04843 607 aaKnown RBP11.42□□□□□ -0.58
COPB1-201ENST00000249923 GPS2Q13227 327 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 CT47A1Q5JQC4 288 aaPredicted RBP11.42□□□□□ -0.58
COPB1-201ENST00000249923 BLIDQ8IZY5 108 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 IQUBQ8NA54 791 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 PNMA1Q8ND90 353 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 CCDC12Q8WUD4 166 aaPredicted RBP11.42□□□□□ -0.58
COPB1-201ENST00000249923 NELFBQ8WX92 580 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 EEF2KMTQ96G04 330 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 PLIN2Q99541 437 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 CHP1Q99653 195 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 RWDD2AQ9UIY3 292 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 FLT1P17948 1338 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 ITIH6Q6UXX5 1313 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 RASSF10A6NK89 507 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
COPB1-201ENST00000249923 CCDC175P0C221 793 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 NARFQ9UHQ1 456 aa11.42□□□□□ -0.58
COPB1-201ENST00000249923 GOLGA8HP0CJ92 632 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 TRAPPC10P48553 1259 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 COPB1P53618 953 aaKnown RBP11.41□□□□□ -0.58
COPB1-201ENST00000249923 FKBP15Q5T1M5 1219 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 ZNF658Q5TYW1 1059 aaPredicted RBP11.41□□□□□ -0.58
COPB1-201ENST00000249923 PNKPQ96T60 521 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 DISC1Q9NRI5 854 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 KCNJ18B7U540 433 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 STXBP3O00186 592 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 BMP15O95972 392 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 KCNJ12Q14500 433 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 INF2Q27J81 1249 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 GDAP1L1Q96MZ0 367 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 PCDHA4Q9UN74 947 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 HNRNPH2P55795 449 aaKnown RBP11.41□□□□□ -0.58
COPB1-201ENST00000249923 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
COPB1-201ENST00000249923 PAK1Q13153 545 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 GRM4Q14833 912 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 WDR59Q6PJI9 974 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 FUT8Q9BYC5 575 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 PLEKHA4Q9H4M7 779 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 BRMS1Q9HCU9 246 aa11.41□□□□□ -0.58
COPB1-201ENST00000249923 GOLGA6L9A6NEM1 432 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 EDIL3O43854 480 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
COPB1-201ENST00000249923 ZNF507Q8TCN5 953 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
COPB1-201ENST00000249923 LTBP4Q8N2S1 1624 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 KLK7P49862 253 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 ARL6IP4Q66PJ3 421 aaKnown RBP11.4□□□□□ -0.58
COPB1-201ENST00000249923 GPIHBP1Q8IV16 184 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 SLC35F6Q8N357 371 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 MTMR7Q9Y216 660 aa11.4□□□□□ -0.58
COPB1-201ENST00000249923 RASA1P20936 1047 aa11.4□□□□□ -0.59
COPB1-201ENST00000249923 NLRP3Q96P20 1036 aa11.4□□□□□ -0.59
COPB1-201ENST00000249923 NAA15Q9BXJ9 866 aaKnown RBP11.4□□□□□ -0.59
COPB1-201ENST00000249923 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.59
COPB1-201ENST00000249923 TTC26A0AVF1 554 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 N4BP3O15049 544 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms