RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Setdb2Q8C267 713 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ildr1Q8CBR1 537 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ppp2r5dQ91V89 594 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Xrcc4Q924T3 326 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Znf287Q9EQB9 759 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Scn9aQ62205 1984 aa17.56■□□□□ 0.4
Vcan-201ENSMUST00000109543 Scgb2b18A0A087WPA9 112 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ccdc191J3QQ27 883 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Pbx1P41778 430 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Lilrb3P97484 841 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Tm4sf1Q64302 202 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Taok2Q6ZQ29 1240 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Znf18Q810A1 556 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Fam13bQ8K2H3 851 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Desi2Q9D291 194 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Tubb4aQ9D6F9 444 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Mtmr9Q9Z2D0 545 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Apol7aB2RT54 418 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ces1aE9PYP1 563 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Chrna5Q2MKA5 467 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Zbtb39Q6PDK0 712 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Dpp8Q80YA7 892 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Eps8l1Q8R5F8 716 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Krt82Q99M74 516 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 Vstm4T1NXB5 319 aa17.55■□□□□ 0.4
Vcan-201ENSMUST00000109543 GpiP06745 558 aaKnown RBP17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gna11P21278 359 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Olfr121Q5CZY0 321 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Mtss1lQ6P9S0 715 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Trmt2aQ8BNV1 574 aaKnown RBP17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Fbxo18Q8K2I9 1042 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Trub2Q91WG3 331 aaKnown RBP17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Mtmr4Q91XS1 1190 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 TbcbQ9D1E6 244 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Krtap5-3Q9D226 196 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gm7356A0A087WSA6 508 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Herc3A6H6S0 1050 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Akr1c19G3X9Y6 323 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Wdhd1P59328 1117 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gja5Q01231 358 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gucy2cQ3UWA6 1072 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Tnni3kQ5GIG6 834 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Smarca1Q6PGB8 1046 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Txndc16Q7TN22 820 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ccdc122Q8BVN0 290 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 WdpcpQ8C456 722 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Cdan1Q8CC12 1239 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Snrnp35Q9D384 244 aa17.54■□□□□ 0.4
Vcan-201ENSMUST00000109543 Lekr1B2RVN1 116 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Usp17lbE9Q9U0 468 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 NefhP19246 1090 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 EmbP21995 330 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 NppbP40753 121 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Atp6v1aP50516 617 aaKnown RBP17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gcnt1Q09324 428 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Kiaa0319Q5SZV5 1081 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Lamb3Q61087 1168 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Glra4Q61603 456 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Arl6ip4Q9JM93 229 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 1700003F12RikA2AKE5 210 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Rasa2P58069 847 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Fam198bQ3UPI1 517 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ccna1Q61456 421 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Stac3Q8BZ71 360 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ccdc38Q8CDN8 563 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Cabp7Q91ZM8 215 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Zbed3Q9D0L1 228 aa17.53■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gm4307E9PZY4 289 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gm4312K9J7E2 289 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Cbx1P83917 185 aaKnown RBP17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Jdp2P97875 163 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Klhdc9Q3USL1 350 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Mboat7Q8CHK3 473 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 AdpgkQ8VDL4 496 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Vps33aQ9D2N9 598 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Galntl5Q9D4M9 431 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Mss51Q9D5Z5 446 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Gm5114W4VSN8 858 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 TicrrQ8BQ33 1889 aa17.52■□□□□ 0.4
Vcan-201ENSMUST00000109543 Ly75Q60767 1723 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 PpardP35396 440 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Nell2Q61220 819 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Cypt2Q6P924 180 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Galnt17Q7TT15 598 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 SltmQ8CH25 1031 aaKnown RBP17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Cd209bQ8CJ91 325 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Vps18Q8R307 973 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Tmx1Q8VBT0 278 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Mfap3lQ9D3X9 409 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Copb1Q9JIF7 953 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Abhd2Q9QXM0 425 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Cyp2ab1S4R196 498 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Col4a5Q63ZW6 1691 aa17.52■□□□□ 0.39
Vcan-201ENSMUST00000109543 Zfp831A2ADM8 1628 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Dnai2A2AC93 623 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Vmn2r71L7N2D8 855 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ric8aQ3TIR3 530 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 GnptabQ69ZN6 1235 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Clca4aQ6Q473 924 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Tango6Q8C3S2 1079 aa17.51■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms