RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 RydenQ8CAK3 290 aaKnown RBP10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Nrbf2Q8VCQ3 287 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Elac1Q8VEB6 362 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Atp6v1b1Q91YH6 513 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Bmp2kQ91Z96 1138 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Zbed3Q9D0L1 228 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Q9D4A5 307 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ehbp1l1Q99MS7 1716 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Calcoco2A2A6M5 331 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Kng1O08677 661 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ctnna1P26231 906 aaKnown RBP10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ptx3P48759 381 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Smad4P97471 551 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Nol8Q3UHX0 1147 aaKnown RBP10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tbx2Q60707 711 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ncaph2Q8BSP2 607 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cnot4Q8BT14 575 aaKnown RBP10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cnot6lQ8VEG6 555 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 GhitmQ91VC9 346 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ascc1Q9D8Z1 356 aaKnown RBP10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tacc3Q9JJ11 631 aa10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tagln2Q9WVA4 199 aaKnown RBP10.27□□□□□ -0.77
Upf3b-201ENSMUST00000076265 PurbO35295 324 aaKnown RBP10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ckmt1P30275 418 aaKnown RBP10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Col19a1Q0VF58 1136 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Trim43aQ3TL54 445 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cracr2aQ3UP38 310 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ccdc110Q3V125 848 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Stxbp3Q60770 592 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Pced1aQ6P1Z5 449 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rpp38Q80UU2 280 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Epn1Q80VP1 575 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tnpo1Q8BFY9 898 aaKnown RBP10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rusc1Q8BG26 893 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Galnt13Q8CF93 556 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cacnb4Q8R0S4 519 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Dnajc24Q91ZF0 196 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Sf3b3Q921M3 1217 aaKnown RBP10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rhobtb3Q9CTN4 611 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tjap1Q9DCD5 539 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Eif3fQ9DCH4 361 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Vwa7Q9JHA8 891 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rprd2Q6NXI6 1469 aaKnown RBP10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Slit3Q9WVB4 1523 aa10.26□□□□□ -0.77
Upf3b-201ENSMUST00000076265 A0A286YDG0 184 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm10376D3YXI8 184 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm3543D3Z235 184 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm4181E9Q7X3 184 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm3383J3QQ59 259 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm10375L7N286 184 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm3573L7N292 184 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 NfkbieO54910 364 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gjb3P28231 270 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Usp13Q5BKP2 858 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 MmeQ61391 750 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Btbd11Q6GQW0 1109 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tmc4Q7TQ65 694 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Zer1Q80ZJ6 779 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ddx18Q8K363 660 aaKnown RBP10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Mogat1Q91ZV4 335 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 StambpQ9CQ26 424 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Q9D9H8 365 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 1700001F09RikQ9DAR5 184 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Dgcr8Q9EQM6 773 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ankrd36D3Z4K0 1415 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Col18a1P39061 1774 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Bard1O70445 765 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Anxa6P14824 673 aaKnown RBP10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Eya1P97767 591 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ccdc129Q14B48 1034 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Nrg1Q6DR99 700 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tmem132eQ6IEE6 982 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Pdcl2Q78Y63 240 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tbc1d22bQ80VE5 505 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ipo9Q91YE6 1041 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cfap53Q9D439 514 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Arhgef28P97433 1693 aa10.25□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gm4307E9PZY4 289 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Kpna6O35345 536 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cdc25aP48964 514 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Atp6v1e1P50518 226 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cfap157Q0VFX2 523 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Perm1Q149B8 807 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 H2-M3Q31093 336 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rnf180Q3U827 592 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ahcyl1Q80SW1 530 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Kiaa1524Q8BWY9 907 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rbm14Q8C2Q3 669 aaKnown RBP10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cyp4a12aQ91WL5 508 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Mat1aQ91X83 396 aaKnown RBP10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 WaslQ91YD9 501 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Armc9Q9D2I5 817 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Atp11cQ9QZW0 1129 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Mroh3A0A1D5RM54 893 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Syndig1A2ANU3 258 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Fam155bA2BDP1 471 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Axin2O88566 840 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tmod1P49813 359 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Six5P70178 719 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Lrfn1Q2WF71 766 aa10.24□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 131.5 ms