RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	PSO2	P30620	661 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	MVD1	P32377	396 aa	Known RBP	4.79	□□□□□ -1.64
RCL1	YOL010W	YMC2	P38087	329 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	SMF1	P38925	575 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	BDH2	P39713	417 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	PIC2	P40035	300 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	CCT5	P40413	562 aa	Known RBP	4.79	□□□□□ -1.64
RCL1	YOL010W	MND2	P40577	368 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	HYR1	P40581	163 aa	Known RBP	4.79	□□□□□ -1.64
RCL1	YOL010W	CTK3	P46963	296 aa	Predicted RBP	4.79	□□□□□ -1.64
RCL1	YOL010W	GLG2	P47011	380 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	HST1	P53685	503 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	EGD1	Q02642	157 aa	Known RBP	4.79	□□□□□ -1.64
RCL1	YOL010W	GRX3	Q03835	250 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	DIC1	Q06143	298 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	YPL216W	Q08964	1102 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	RRP6	Q12149	733 aa	Known RBP	4.79	□□□□□ -1.64
RCL1	YOL010W	SFI1	Q12369	946 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	PEX11	Q12462	236 aa		4.79	□□□□□ -1.64
RCL1	YOL010W	YKR104W	P0CE69	306 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	TAF14	P35189	244 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	VAC8	P39968	578 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	CIR1	P42940	261 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	TOS3	P43637	560 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	MRX6	P48564	524 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	YNL040W	P53960	456 aa	Predicted RBP	4.78	□□□□□ -1.64
RCL1	YOL010W	GPD1	Q00055	391 aa	Known RBP	4.78	□□□□□ -1.64
RCL1	YOL010W	MEH1	Q02205	184 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	COG4	Q06096	861 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	SPP382	Q06411	708 aa	Predicted RBP	4.78	□□□□□ -1.64
RCL1	YOL010W	CSR1	Q06705	408 aa	Known RBP	4.78	□□□□□ -1.64
RCL1	YOL010W	AI5_BETA	Q9ZZX0	354 aa		4.78	□□□□□ -1.64
RCL1	YOL010W	SEC16	P48415	2195 aa	Known RBP	4.78	□□□□□ -1.64
RCL1	YOL010W	INH1	P01097	85 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	PET111	P08468	800 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	SST2	P11972	698 aa	Known RBP	4.77	□□□□□ -1.65
RCL1	YOL010W	BCD1	P38772	366 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	TIM17	P39515	158 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	RAD26	P40352	1085 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	CNN1	P43618	361 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	STU2	P46675	888 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	YPT11	P48559	417 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	EXG2	P52911	562 aa		4.77	□□□□□ -1.65
RCL1	YOL010W	DRN1	P53255	507 aa	Known RBP	4.77	□□□□□ -1.65
RCL1	YOL010W	YOR097C	Q12274	175 aa	Predicted RBP	4.77	□□□□□ -1.65
RCL1	YOL010W	PCT1	P13259	424 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	PRI2	P20457	528 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	YCR006C	P25350	157 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	CDC3	P32457	520 aa	Known RBP	4.76	□□□□□ -1.65
RCL1	YOL010W	VPS24	P36095	224 aa	Known RBP	4.76	□□□□□ -1.65
RCL1	YOL010W	CTP1	P38152	299 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	YAL037W	P39728	267 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	ZIM17	P42844	174 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	MET12	P46151	657 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	YTP1	P53584	459 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	PEX25	Q02969	394 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	YDR131C	Q03899	556 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	VMS1	Q04311	632 aa	Known RBP	4.76	□□□□□ -1.65
RCL1	YOL010W	UFO1	Q04511	668 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	THI20	Q08224	551 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	APL5	Q08951	932 aa	Known RBP	4.76	□□□□□ -1.65
RCL1	YOL010W	LSP1	Q12230	341 aa	Known RBP	4.76	□□□□□ -1.65
RCL1	YOL010W	YDR262W	Q12331	272 aa		4.76	□□□□□ -1.65
RCL1	YOL010W	RPL7A	P05737	244 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	CDC37	P06101	506 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	GPA1	P08539	472 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	TUB1	P09733	447 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	SEC62	P21825	274 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	BAS1	P22035	811 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	MRPL8	P22353	238 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	MNE1	P24720	663 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	MLS1	P30952	554 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	SPC110	P32380	944 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	MKK2	P32491	506 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	SPR1	P32603	445 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	HSL7	P38274	827 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	SRP68	P38687	599 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	NPR3	P38742	1146 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	YER130C	P39959	443 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	YEL075C	P39972	122 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	PAN6	P40459	309 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	RPS10B	P46784	105 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	YJR030C	P47101	745 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	YGR237C	P50089	785 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	KTR6	P54070	446 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	SRP1	Q02821	542 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	PPN1	Q04119	674 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	YPR114W	Q06107	315 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	ADY3	Q07732	790 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	RPS10A	Q08745	105 aa	Predicted RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	FAL1	Q12099	399 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	YRA1	Q12159	226 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	RPL7B	Q12213	244 aa	Known RBP	4.75	□□□□□ -1.65
RCL1	YOL010W	HSP42	Q12329	375 aa		4.75	□□□□□ -1.65
RCL1	YOL010W	MET16	P18408	261 aa	Predicted RBP	4.74	□□□□□ -1.65
RCL1	YOL010W	DAL2	P25335	343 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	MFT1	P33441	392 aa	Known RBP	4.74	□□□□□ -1.65
RCL1	YOL010W	ADE17	P38009	592 aa	Known RBP	4.74	□□□□□ -1.65
RCL1	YOL010W	ARA1	P38115	344 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	EFM2	P38347	419 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 55 ms