RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C ARG7Q04728 441 aa5.03□□□□□ -1.6
SEC39YLR440C YPR147CQ06522 304 aaKnown RBP5.03□□□□□ -1.6
SEC39YLR440C MUM3Q08750 479 aa5.03□□□□□ -1.6
SEC39YLR440C GUP2Q08929 609 aa5.03□□□□□ -1.6
SEC39YLR440C LDB19Q12502 818 aa5.03□□□□□ -1.6
SEC39YLR440C ENO2P00925 437 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C CAN1P04817 590 aa5.02□□□□□ -1.61
SEC39YLR440C KRS1P15180 591 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C CKA1P15790 372 aa5.02□□□□□ -1.61
SEC39YLR440C DAL7P21826 554 aa5.02□□□□□ -1.61
SEC39YLR440C AEP2P22136 580 aa5.02□□□□□ -1.61
SEC39YLR440C IMG1P25626 169 aa5.02□□□□□ -1.61
SEC39YLR440C URA7P28274 579 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C MRPL10P36520 322 aa5.02□□□□□ -1.61
SEC39YLR440C MAP2P38174 421 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C PTC2P39966 464 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C MRX1P40050 688 aa5.02□□□□□ -1.61
SEC39YLR440C YMR134WP40207 237 aa5.02□□□□□ -1.61
SEC39YLR440C SIP5P40210 489 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C UBP7P40453 1071 aa5.02□□□□□ -1.61
SEC39YLR440C FET4P40988 552 aa5.02□□□□□ -1.61
SEC39YLR440C YGL176CP46945 554 aa5.02□□□□□ -1.61
SEC39YLR440C BRO1P48582 844 aa5.02□□□□□ -1.61
SEC39YLR440C FMS1P50264 508 aa5.02□□□□□ -1.61
SEC39YLR440C RRN9P53437 365 aa5.02□□□□□ -1.61
SEC39YLR440C RCO1Q04779 684 aa5.02□□□□□ -1.61
SEC39YLR440C HCR1Q05775 265 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C DUS3Q06053 668 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C YPQ2Q06328 317 aa5.02□□□□□ -1.61
SEC39YLR440C SDO1Q07953 250 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C BDS1Q08347 646 aa5.02□□□□□ -1.61
SEC39YLR440C HFI1Q12060 488 aa5.02□□□□□ -1.61
SEC39YLR440C GET4Q12125 312 aa5.02□□□□□ -1.61
SEC39YLR440C YPR022CQ12139 1133 aa5.02□□□□□ -1.61
SEC39YLR440C MDM20Q12387 796 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C GAL4P04386 881 aa5.02□□□□□ -1.61
SEC39YLR440C KIN28P06242 306 aa5.02□□□□□ -1.61
SEC39YLR440C MSS18P08593 268 aa5.02□□□□□ -1.61
SEC39YLR440C SRD1P09007 221 aa5.02□□□□□ -1.61
SEC39YLR440C FBA1P14540 359 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C POL30P15873 258 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C CBF1P17106 351 aa5.02□□□□□ -1.61
SEC39YLR440C PRE8P23639 250 aa5.02□□□□□ -1.61
SEC39YLR440C SER1P33330 395 aaKnown RBP5.02□□□□□ -1.61
SEC39YLR440C MRPL7P36519 292 aa5.02□□□□□ -1.61
SEC39YLR440C RFT1P38206 574 aaPredicted RBP5.02□□□□□ -1.61
SEC39YLR440C SLI15P38283 698 aa5.02□□□□□ -1.61
SEC39YLR440C UBX7P38349 436 aa5.02□□□□□ -1.61
SEC39YLR440C LTP1P40347 161 aa5.02□□□□□ -1.61
SEC39YLR440C YFH7P43591 353 aa5.02□□□□□ -1.61
SEC39YLR440C YJR054WP47114 497 aa5.02□□□□□ -1.61
SEC39YLR440C RSM26P47141 266 aa5.02□□□□□ -1.61
SEC39YLR440C IBA57P47158 497 aa5.02□□□□□ -1.61
SEC39YLR440C YJR141WP47172 347 aaPredicted RBP5.02□□□□□ -1.61
SEC39YLR440C MND1P53102 219 aa5.02□□□□□ -1.61
SEC39YLR440C NUT1P53114 1132 aa5.02□□□□□ -1.61
SEC39YLR440C NSA1P53136 463 aaPredicted RBP5.02□□□□□ -1.61
SEC39YLR440C YGR125WP53273 1036 aa5.02□□□□□ -1.61
SEC39YLR440C PUS6P53294 404 aa5.02□□□□□ -1.61
SEC39YLR440C MPP6P53725 186 aaPredicted RBP5.02□□□□□ -1.61
SEC39YLR440C BOP3P53958 396 aa5.02□□□□□ -1.61
SEC39YLR440C YMD8Q03697 442 aa5.02□□□□□ -1.61
SEC39YLR440C YOL019WQ08157 551 aa5.02□□□□□ -1.61
SEC39YLR440C REX4Q08237 289 aa5.02□□□□□ -1.61
SEC39YLR440C ALE1Q08548 619 aa5.02□□□□□ -1.61
SEC39YLR440C YPL272CQ08984 517 aa5.02□□□□□ -1.61
SEC39YLR440C SEM1O94742 89 aa5.01□□□□□ -1.61
SEC39YLR440C SCEIP03882 235 aa5.01□□□□□ -1.61
SEC39YLR440C CDC9P04819 755 aa5.01□□□□□ -1.61
SEC39YLR440C PHR1P05066 565 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SEC39YLR440C CBP6P07253 162 aaPredicted RBP5.01□□□□□ -1.61
SEC39YLR440C RPS6AP0CX37 236 aaKnown RBP5.01□□□□□ -1.61
SEC39YLR440C RPS6BP0CX38 236 aaPredicted RBP5.01□□□□□ -1.61
SEC39YLR440C MTF2P10849 440 aa5.01□□□□□ -1.61
SEC39YLR440C TRK1P12685 1235 aa5.01□□□□□ -1.61
SEC39YLR440C PRE10P21242 288 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SEC39YLR440C APA2P22108 325 aa5.01□□□□□ -1.61
SEC39YLR440C ADP1P25371 1049 aa5.01□□□□□ -1.61
SEC39YLR440C GCD11P32481 527 aaKnown RBP5.01□□□□□ -1.61
SEC39YLR440C CYM1P32898 989 aa5.01□□□□□ -1.61
SEC39YLR440C VAM7P32912 316 aa5.01□□□□□ -1.61
SEC39YLR440C SRB2P34162 210 aa5.01□□□□□ -1.61
SEC39YLR440C SRP102P36057 244 aaPredicted RBP5.01□□□□□ -1.61
SEC39YLR440C SUL1P38359 859 aa5.01□□□□□ -1.61
SEC39YLR440C RRP3P38712 501 aaKnown RBP5.01□□□□□ -1.61
SEC39YLR440C FHL1P39521 936 aa5.01□□□□□ -1.61
SEC39YLR440C MMF1P40185 145 aaKnown RBP5.01□□□□□ -1.61
SEC39YLR440C IMD3P50095 523 aaKnown RBP5.01□□□□□ -1.61
SEC39YLR440C ACS1Q01574 713 aa5.01□□□□□ -1.61
SEC39YLR440C ATC1Q04005 294 aa5.01□□□□□ -1.61
SEC39YLR440C THI7Q05998 598 aa5.01□□□□□ -1.61
SEC39YLR440C YLR413WQ06689 675 aa5.01□□□□□ -1.61
SEC39YLR440C YPR084WQ06821 456 aa5.01□□□□□ -1.61
SEC39YLR440C VAS1P07806 1104 aaKnown RBP5□□□□□ -1.61
SEC39YLR440C SPT10P35208 640 aa5□□□□□ -1.61
SEC39YLR440C GLG1P36143 616 aa5□□□□□ -1.61
SEC39YLR440C DAD2P36162 133 aa5□□□□□ -1.61
SEC39YLR440C AIM2P39721 246 aa5□□□□□ -1.61
SEC39YLR440C BOL3P39724 118 aa5□□□□□ -1.61
SEC39YLR440C RPS26AP39938 119 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms