RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W RIM4P38741 713 aa9.04□□□□□ -0.96
SFP1YLR403W YNL320WP42840 284 aa9.04□□□□□ -0.96
SFP1YLR403W EMW1P42842 904 aaKnown RBP9.04□□□□□ -0.96
SFP1YLR403W AIP1P46680 615 aaKnown RBP9.04□□□□□ -0.96
SFP1YLR403W YJR056CP47115 236 aa9.04□□□□□ -0.96
SFP1YLR403W PAL1Q05518 499 aaKnown RBP9.04□□□□□ -0.96
SFP1YLR403W GIS3Q12418 502 aa9.04□□□□□ -0.96
SFP1YLR403W SEC18P18759 758 aaKnown RBP9.04□□□□□ -0.96
SFP1YLR403W RAD24P32641 659 aa9.04□□□□□ -0.96
SFP1YLR403W TPA1P40032 644 aaKnown RBP9.04□□□□□ -0.96
SFP1YLR403W YIL166CP40445 542 aa9.04□□□□□ -0.96
SFP1YLR403W DLD2P46681 530 aaKnown RBP9.04□□□□□ -0.96
SFP1YLR403W RPC17P47076 161 aa9.04□□□□□ -0.96
SFP1YLR403W TWF1P53250 332 aa9.04□□□□□ -0.96
SFP1YLR403W HCR1Q05775 265 aaKnown RBP9.04□□□□□ -0.96
SFP1YLR403W DIA2Q08496 732 aaPredicted RBP9.04□□□□□ -0.96
SFP1YLR403W PNS1Q12412 539 aa9.04□□□□□ -0.96
SFP1YLR403W AI5_ALPHAQ9ZZX1 630 aa9.04□□□□□ -0.96
SFP1YLR403W URB1P34241 1764 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W TUB1P09733 447 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W GRX2P17695 143 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W CMK2P22517 447 aa9.03□□□□□ -0.96
SFP1YLR403W GIT1P25346 518 aa9.03□□□□□ -0.96
SFP1YLR403W MAE1P36013 669 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W MCM7P38132 845 aa9.03□□□□□ -0.96
SFP1YLR403W YHR045WP38775 560 aa9.03□□□□□ -0.96
SFP1YLR403W PSY2P40164 858 aa9.03□□□□□ -0.96
SFP1YLR403W CIN1P40987 1014 aa9.03□□□□□ -0.96
SFP1YLR403W MLC1P53141 149 aa9.03□□□□□ -0.96
SFP1YLR403W MRPL13Q02204 264 aa9.03□□□□□ -0.96
SFP1YLR403W ESA1Q08649 445 aa9.03□□□□□ -0.96
SFP1YLR403W TSC13Q99190 310 aa9.03□□□□□ -0.96
SFP1YLR403W ADE5,7P07244 802 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W PUT2P07275 575 aa9.03□□□□□ -0.96
SFP1YLR403W CAR2P07991 424 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W PDC5P16467 563 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W COX11P19516 300 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W RPD3P32561 433 aa9.03□□□□□ -0.96
SFP1YLR403W FRD1P32614 470 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W SEC61P32915 480 aa9.03□□□□□ -0.96
SFP1YLR403W JEN1P36035 616 aa9.03□□□□□ -0.96
SFP1YLR403W YKL077WP36081 392 aa9.03□□□□□ -0.96
SFP1YLR403W RPE1P46969 238 aa9.03□□□□□ -0.96
SFP1YLR403W CUE5Q08412 411 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W RPN5Q12250 445 aaKnown RBP9.03□□□□□ -0.96
SFP1YLR403W VTH1P40438 1549 aa9.02□□□□□ -0.97
SFP1YLR403W STF1P01098 86 aa9.02□□□□□ -0.97
SFP1YLR403W ARG80P07249 177 aa9.02□□□□□ -0.97
SFP1YLR403W RPS6AP0CX37 236 aaKnown RBP9.02□□□□□ -0.97
SFP1YLR403W RPS6BP0CX38 236 aaPredicted RBP9.02□□□□□ -0.97
SFP1YLR403W SBA1P28707 216 aaKnown RBP9.02□□□□□ -0.97
SFP1YLR403W GUT2P32191 649 aa9.02□□□□□ -0.97
SFP1YLR403W MNN1P39106 762 aa9.02□□□□□ -0.97
SFP1YLR403W GPB2P39717 880 aa9.02□□□□□ -0.97
SFP1YLR403W IES5P40060 125 aa9.02□□□□□ -0.97
SFP1YLR403W BNA1P47096 177 aa9.02□□□□□ -0.97
SFP1YLR403W CBK1P53894 756 aa9.02□□□□□ -0.97
SFP1YLR403W RNY1Q02933 434 aaKnown RBP9.02□□□□□ -0.97
SFP1YLR403W PEX10Q05568 337 aa9.02□□□□□ -0.97
SFP1YLR403W FAR10Q06001 478 aa9.02□□□□□ -0.97
SFP1YLR403W GYP1Q08484 637 aa9.02□□□□□ -0.97
SFP1YLR403W CLN3P13365 580 aa9.01□□□□□ -0.97
SFP1YLR403W APA2P22108 325 aa9.01□□□□□ -0.97
SFP1YLR403W GLC3P32775 704 aa9.01□□□□□ -0.97
SFP1YLR403W TGL4P36165 910 aa9.01□□□□□ -0.97
SFP1YLR403W PCS60P38137 543 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
SFP1YLR403W RFT1P38206 574 aaPredicted RBP9.01□□□□□ -0.97
SFP1YLR403W PCA1P38360 1216 aa9.01□□□□□ -0.97
SFP1YLR403W YHR054CP38780 354 aa9.01□□□□□ -0.97
SFP1YLR403W RSC30P38781 883 aa9.01□□□□□ -0.97
SFP1YLR403W GIC1P38785 314 aa9.01□□□□□ -0.97
SFP1YLR403W RFC2P40348 353 aa9.01□□□□□ -0.97
SFP1YLR403W ICE2P40499 491 aa9.01□□□□□ -0.97
SFP1YLR403W YGL108CP53139 140 aa9.01□□□□□ -0.97
SFP1YLR403W YGR012WP53206 393 aa9.01□□□□□ -0.97
SFP1YLR403W YGR026WP53217 278 aa9.01□□□□□ -0.97
SFP1YLR403W VPS62P53285 467 aa9.01□□□□□ -0.97
SFP1YLR403W RSM27P53305 110 aa9.01□□□□□ -0.97
SFP1YLR403W ALD6P54115 500 aaKnown RBP9.01□□□□□ -0.97
SFP1YLR403W SND1Q04007 877 aa9.01□□□□□ -0.97
SFP1YLR403W ISR1Q06098 443 aaKnown RBP9.01□□□□□ -0.97
SFP1YLR403W ESF1Q06344 628 aaKnown RBP9.01□□□□□ -0.97
SFP1YLR403W MRL1Q06815 381 aa9.01□□□□□ -0.97
SFP1YLR403W COS7Q07788 383 aa9.01□□□□□ -0.97
SFP1YLR403W YOR111WQ99210 232 aa9.01□□□□□ -0.97
SFP1YLR403W CIT2P08679 460 aa9.01□□□□□ -0.97
SFP1YLR403W WHI2P12611 486 aa9.01□□□□□ -0.97
SFP1YLR403W CHL1P22516 861 aaPredicted RBP9.01□□□□□ -0.97
SFP1YLR403W SGV1P23293 657 aaKnown RBP9.01□□□□□ -0.97
SFP1YLR403W SNT1P25357 1226 aa9.01□□□□□ -0.97
SFP1YLR403W RSA4P25382 515 aaKnown RBP9.01□□□□□ -0.97
SFP1YLR403W HRR25P29295 494 aaKnown RBP9.01□□□□□ -0.97
SFP1YLR403W CHS3P29465 1165 aa9.01□□□□□ -0.97
SFP1YLR403W YKL133CP36066 463 aa9.01□□□□□ -0.97
SFP1YLR403W DIA4P38705 446 aaPredicted RBP9.01□□□□□ -0.97
SFP1YLR403W SOK1P40317 901 aa9.01□□□□□ -0.97
SFP1YLR403W ALR2P43553 858 aa9.01□□□□□ -0.97
SFP1YLR403W USE1P53146 245 aa9.01□□□□□ -0.97
SFP1YLR403W CUL3P53202 744 aa9.01□□□□□ -0.97
SFP1YLR403W PEX8P53248 589 aa9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 114.9 ms