RNA–Protein interactions for RNA: YKL108W

SLD2, Transcript of Single-stranded DNA origin-binding and annealing protein, yeastyeast

Gene SLD2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD2YKL108W PUP2P32379 260 aa5.37□□□□□ -1.55
SLD2YKL108W PUB1P32588 453 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SLD2YKL108W CMC1P36064 111 aa5.37□□□□□ -1.55
SLD2YKL108W TCD2P36101 447 aaKnown RBP5.37□□□□□ -1.55
SLD2YKL108W APL3P38065 1025 aa5.37□□□□□ -1.55
SLD2YKL108W MAM1P40065 302 aa5.37□□□□□ -1.55
SLD2YKL108W MDE1P47095 244 aa5.37□□□□□ -1.55
SLD2YKL108W STR3P53101 465 aaKnown RBP5.37□□□□□ -1.55
SLD2YKL108W EOS1P53938 366 aa5.37□□□□□ -1.55
SLD2YKL108W RPA49Q01080 415 aaPredicted RBP5.37□□□□□ -1.55
SLD2YKL108W INA17Q02888 182 aa5.37□□□□□ -1.55
SLD2YKL108W YML053CQ04978 212 aa5.37□□□□□ -1.55
SLD2YKL108W SIR3P06701 978 aa5.36□□□□□ -1.55
SLD2YKL108W AMD2P22580 549 aa5.36□□□□□ -1.55
SLD2YKL108W POT1P27796 417 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SLD2YKL108W PDB1P32473 366 aaKnown RBP5.36□□□□□ -1.55
SLD2YKL108W LIP5P32875 414 aa5.36□□□□□ -1.55
SLD2YKL108W KSP1P38691 1029 aaKnown RBP5.36□□□□□ -1.55
SLD2YKL108W FYV8P46949 817 aaKnown RBP5.36□□□□□ -1.55
SLD2YKL108W IMD4P50094 524 aaKnown RBP5.36□□□□□ -1.55
SLD2YKL108W TWF1P53250 332 aa5.36□□□□□ -1.55
SLD2YKL108W SNF12P53628 566 aa5.36□□□□□ -1.55
SLD2YKL108W ADE16P54113 591 aaKnown RBP5.36□□□□□ -1.55
SLD2YKL108W MAK10Q02197 733 aa5.36□□□□□ -1.55
SLD2YKL108W RSM28Q03430 361 aa5.36□□□□□ -1.55
SLD2YKL108W UFO1Q04511 668 aa5.36□□□□□ -1.55
SLD2YKL108W RQC1Q05468 723 aaKnown RBP5.36□□□□□ -1.55
SLD2YKL108W YLR456WQ06199 204 aa5.36□□□□□ -1.55
SLD2YKL108W MMR1Q06324 491 aa5.36□□□□□ -1.55
SLD2YKL108W YDL242WQ07746 117 aa5.36□□□□□ -1.55
SLD2YKL108W REX3Q12090 404 aa5.36□□□□□ -1.55
SLD2YKL108W RLM1Q12224 676 aa5.36□□□□□ -1.55
SLD2YKL108W YML133CQ03099 1374 aa5.36□□□□□ -1.55
SLD2YKL108W YLL067CQ07888 1374 aa5.36□□□□□ -1.55
SLD2YKL108W YLL066CQ99208 1374 aa5.36□□□□□ -1.55
SLD2YKL108W WBP1P33767 430 aaKnown RBP5.35□□□□□ -1.55
SLD2YKL108W SEF1P34228 1148 aa5.35□□□□□ -1.55
SLD2YKL108W NTR2P36118 322 aaPredicted RBP5.35□□□□□ -1.55
SLD2YKL108W YPT10P38146 199 aa5.35□□□□□ -1.55
SLD2YKL108W FTH1P38310 465 aa5.35□□□□□ -1.55
SLD2YKL108W YHR054CP38780 354 aa5.35□□□□□ -1.55
SLD2YKL108W YNG2P38806 282 aaKnown RBP5.35□□□□□ -1.55
SLD2YKL108W FMP52P40008 231 aa5.35□□□□□ -1.55
SLD2YKL108W DLD2P46681 530 aaKnown RBP5.35□□□□□ -1.55
SLD2YKL108W MSY1P48527 492 aa5.35□□□□□ -1.55
SLD2YKL108W INP52P50942 1183 aa5.35□□□□□ -1.55
SLD2YKL108W RPS15Q01855 142 aaKnown RBP5.35□□□□□ -1.55
SLD2YKL108W ARG7Q04728 441 aa5.35□□□□□ -1.55
SLD2YKL108W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
SLD2YKL108W FMP40Q08968 688 aaPredicted RBP5.35□□□□□ -1.55
SLD2YKL108W RKI1Q12189 258 aa5.35□□□□□ -1.55
SLD2YKL108W RPN5Q12250 445 aaKnown RBP5.35□□□□□ -1.55
SLD2YKL108W MF(ALPHA)1P01149 165 aa5.34□□□□□ -1.55
SLD2YKL108W TPK2P06245 380 aa5.34□□□□□ -1.55
SLD2YKL108W MRP13P12686 339 aa5.34□□□□□ -1.55
SLD2YKL108W KGD1P20967 1014 aaKnown RBP5.34□□□□□ -1.55
SLD2YKL108W MRE11P32829 692 aa5.34□□□□□ -1.55
SLD2YKL108W TIF3P34167 436 aaKnown RBP5.34□□□□□ -1.55
SLD2YKL108W RPF2P36160 344 aaKnown RBP5.34□□□□□ -1.55
SLD2YKL108W ALG5P40350 334 aa5.34□□□□□ -1.55
SLD2YKL108W HXT14P42833 540 aa5.34□□□□□ -1.55
SLD2YKL108W MCM6P53091 1017 aaKnown RBP5.34□□□□□ -1.55
SLD2YKL108W DCP2P53550 970 aaKnown RBP5.34□□□□□ -1.55
SLD2YKL108W YNL092WP53934 400 aa5.34□□□□□ -1.55
SLD2YKL108W PRP3Q03338 469 aaPredicted RBP5.34□□□□□ -1.55
SLD2YKL108W TGS1Q12052 315 aa5.34□□□□□ -1.55
SLD2YKL108W BAG7Q12128 409 aa5.34□□□□□ -1.55
SLD2YKL108W LAM4P38800 1345 aa5.34□□□□□ -1.56
SLD2YKL108W STE4P18851 423 aa5.33□□□□□ -1.56
SLD2YKL108W HES1P35843 434 aa5.33□□□□□ -1.56
SLD2YKL108W AIM3P38266 947 aaKnown RBP5.33□□□□□ -1.56
SLD2YKL108W RRF1P38771 230 aa5.33□□□□□ -1.56
SLD2YKL108W TIF4631P39935 952 aaKnown RBP5.33□□□□□ -1.56
SLD2YKL108W MNP1P53163 194 aaPredicted RBP5.33□□□□□ -1.56
SLD2YKL108W RIA1P53893 1110 aa5.33□□□□□ -1.56
SLD2YKL108W NCS2P53923 493 aaPredicted RBP5.33□□□□□ -1.56
SLD2YKL108W SOV1Q04748 898 aa5.33□□□□□ -1.56
SLD2YKL108W RBS1Q05672 457 aaKnown RBP5.33□□□□□ -1.56
SLD2YKL108W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SLD2YKL108W TY1B-AO13527 1196 aaKnown RBP5.32□□□□□ -1.56
SLD2YKL108W SRP54P20424 541 aaKnown RBP5.32□□□□□ -1.56
SLD2YKL108W APN1P22936 367 aa5.32□□□□□ -1.56
SLD2YKL108W ERG4P25340 473 aa5.32□□□□□ -1.56
SLD2YKL108W LAC1P28496 418 aa5.32□□□□□ -1.56
SLD2YKL108W HEL1P36113 551 aa5.32□□□□□ -1.56
SLD2YKL108W GND1P38720 489 aaKnown RBP5.32□□□□□ -1.56
SLD2YKL108W MUP3P38734 546 aa5.32□□□□□ -1.56
SLD2YKL108W ATF1P40353 525 aa5.32□□□□□ -1.56
SLD2YKL108W CAK1P43568 368 aaPredicted RBP5.32□□□□□ -1.56
SLD2YKL108W DIA3P52290 468 aa5.32□□□□□ -1.56
SLD2YKL108W YGR111WP53265 400 aa5.32□□□□□ -1.56
SLD2YKL108W TOF1P53840 1238 aa5.32□□□□□ -1.56
SLD2YKL108W BOP3P53958 396 aa5.32□□□□□ -1.56
SLD2YKL108W KAP120Q02932 1032 aa5.32□□□□□ -1.56
SLD2YKL108W HEL2Q05580 639 aaKnown RBP5.32□□□□□ -1.56
SLD2YKL108W DCI1Q08558 271 aa5.32□□□□□ -1.56
SLD2YKL108W SKS1Q12505 502 aa5.32□□□□□ -1.56
SLD2YKL108W CHD1P32657 1468 aa5.32□□□□□ -1.56
SLD2YKL108W TCB3Q03640 1545 aaKnown RBP5.32□□□□□ -1.56
SLD2YKL108W AAC1P04710 309 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms