RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W TUB4P53378 473 aa7□□□□□ -1.29
NUP84YDL116W NRD1P53617 575 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
NUP84YDL116W ARC35P53731 342 aaKnown RBP7□□□□□ -1.29
NUP84YDL116W ALG11P53954 548 aaKnown RBP7□□□□□ -1.29
NUP84YDL116W GRX5Q02784 150 aa7□□□□□ -1.29
NUP84YDL116W MZM1Q03429 123 aaPredicted RBP7□□□□□ -1.29
NUP84YDL116W TIF35Q04067 274 aaKnown RBP7□□□□□ -1.29
NUP84YDL116W RIF2Q06208 395 aa7□□□□□ -1.29
NUP84YDL116W YOR389WQ08912 624 aa7□□□□□ -1.29
NUP84YDL116W APE1P14904 514 aa6.99□□□□□ -1.29
NUP84YDL116W RVS161P25343 265 aaKnown RBP6.99□□□□□ -1.29
NUP84YDL116W RAD27P26793 382 aa6.99□□□□□ -1.29
NUP84YDL116W GUT2P32191 649 aa6.99□□□□□ -1.29
NUP84YDL116W NDI1P32340 513 aa6.99□□□□□ -1.29
NUP84YDL116W AEP1P32493 518 aa6.99□□□□□ -1.29
NUP84YDL116W BIT2P38346 545 aa6.99□□□□□ -1.29
NUP84YDL116W MSC7P38694 644 aa6.99□□□□□ -1.29
NUP84YDL116W XDJ1P39102 459 aa6.99□□□□□ -1.29
NUP84YDL116W STB2P46679 850 aa6.99□□□□□ -1.29
NUP84YDL116W YGR117CP53270 476 aa6.99□□□□□ -1.29
NUP84YDL116W NOP19P53317 196 aaPredicted RBP6.99□□□□□ -1.29
NUP84YDL116W LSM3P57743 89 aaKnown RBP6.99□□□□□ -1.29
NUP84YDL116W RSC2Q06488 889 aa6.99□□□□□ -1.29
NUP84YDL116W ATG20Q07528 640 aa6.99□□□□□ -1.29
NUP84YDL116W YLR125WQ12138 136 aa6.99□□□□□ -1.29
NUP84YDL116W PCD1Q12524 340 aa6.99□□□□□ -1.29
NUP84YDL116W ARG3P05150 338 aa6.99□□□□□ -1.29
NUP84YDL116W STE6P12866 1290 aa6.99□□□□□ -1.29
NUP84YDL116W PMI40P29952 429 aaKnown RBP6.99□□□□□ -1.29
NUP84YDL116W SEA4P38164 1038 aa6.99□□□□□ -1.29
NUP84YDL116W MUM2P38236 366 aa6.99□□□□□ -1.29
NUP84YDL116W AST2P39945 430 aaKnown RBP6.99□□□□□ -1.29
NUP84YDL116W FIR1P40020 876 aa6.99□□□□□ -1.29
NUP84YDL116W YJL070CP40361 888 aa6.99□□□□□ -1.29
NUP84YDL116W ARF3P40994 183 aaRIP-Chip data6.99□□□□□ -1.29not detected
NUP84YDL116W RTT101P47050 842 aa6.99□□□□□ -1.29
NUP84YDL116W YGR054WP53235 642 aaKnown RBP6.99□□□□□ -1.29
NUP84YDL116W ESF2P53743 316 aaKnown RBP6.99□□□□□ -1.29
NUP84YDL116W SLT2Q00772 484 aa6.99□□□□□ -1.29
NUP84YDL116W FMP30Q02883 468 aa6.99□□□□□ -1.29
NUP84YDL116W CSR2Q12734 1121 aa6.99□□□□□ -1.29
NUP84YDL116W HSH49Q99181 213 aaPredicted RBP6.99□□□□□ -1.29
NUP84YDL116W MET17P06106 444 aa6.98□□□□□ -1.29
NUP84YDL116W UBA1P22515 1024 aaKnown RBP6.98□□□□□ -1.29
NUP84YDL116W GBP2P25555 427 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
NUP84YDL116W ACH1P32316 526 aa6.98□□□□□ -1.29
NUP84YDL116W NUP2P32499 720 aa6.98□□□□□ -1.29
NUP84YDL116W BCK2P33306 851 aa6.98□□□□□ -1.29
NUP84YDL116W MRP8P35719 219 aa6.98□□□□□ -1.29
NUP84YDL116W TAT2P38967 592 aa6.98□□□□□ -1.29
NUP84YDL116W FAA2P39518 744 aa6.98□□□□□ -1.29
NUP84YDL116W ERP2P39704 215 aa6.98□□□□□ -1.29
NUP84YDL116W YIR007WP40566 764 aa6.98□□□□□ -1.29
NUP84YDL116W ARC1P46672 376 aaKnown RBP6.98□□□□□ -1.29
NUP84YDL116W KTR6P54070 446 aa6.98□□□□□ -1.29
NUP84YDL116W STP1Q00947 519 aa6.98□□□□□ -1.29
NUP84YDL116W HPT1Q04178 221 aaKnown RBP6.98□□□□□ -1.29
NUP84YDL116W HDA3Q06623 655 aa6.98□□□□□ -1.29
NUP84YDL116W FLC1Q08967 793 aa6.98□□□□□ -1.29
NUP84YDL116W THP3Q12049 470 aaKnown RBP6.98□□□□□ -1.29
NUP84YDL116W HFI1Q12060 488 aa6.98□□□□□ -1.29
NUP84YDL116W HEM1P09950 548 aaPredicted RBP6.98□□□□□ -1.29
NUP84YDL116W GCY1P14065 312 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
NUP84YDL116W ACO1P19414 778 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
NUP84YDL116W YUR1P26725 428 aa6.98□□□□□ -1.29
NUP84YDL116W FAD1P38913 306 aa6.98□□□□□ -1.29
NUP84YDL116W COG5P53951 403 aa6.98□□□□□ -1.29
NUP84YDL116W RMI1Q02685 241 aa6.98□□□□□ -1.29
NUP84YDL116W RSN1Q03516 953 aa6.98□□□□□ -1.29
NUP84YDL116W SKY1Q03656 742 aa6.98□□□□□ -1.29
NUP84YDL116W ARA2Q04212 335 aa6.98□□□□□ -1.29
NUP84YDL116W NTG2Q08214 380 aa6.98□□□□□ -1.29
NUP84YDL116W NRT1Q08485 598 aa6.98□□□□□ -1.29
NUP84YDL116W MUM3Q08750 479 aa6.98□□□□□ -1.29
NUP84YDL116W DDC1Q08949 612 aa6.98□□□□□ -1.29
NUP84YDL116W MIS1P09440 975 aaKnown RBP6.97□□□□□ -1.29
NUP84YDL116W MAS2P11914 482 aa6.97□□□□□ -1.29
NUP84YDL116W RPN2P32565 945 aaKnown RBP6.97□□□□□ -1.29
NUP84YDL116W MRS6P32864 603 aaKnown RBP6.97□□□□□ -1.29
NUP84YDL116W CSE1P33307 960 aa6.97□□□□□ -1.29
NUP84YDL116W NTR2P36118 322 aaPredicted RBP6.97□□□□□ -1.29
NUP84YDL116W UTP9P38882 575 aaKnown RBP6.97□□□□□ -1.29
NUP84YDL116W AIM18P38884 321 aa6.97□□□□□ -1.29
NUP84YDL116W YEL023CP39992 682 aa6.97□□□□□ -1.29
NUP84YDL116W VAB2P40003 282 aa6.97□□□□□ -1.29
NUP84YDL116W EFM3P47163 339 aa6.97□□□□□ -1.29
NUP84YDL116W YGR053CP53234 283 aa6.97□□□□□ -1.29
NUP84YDL116W HSP31Q04432 237 aa6.97□□□□□ -1.29
NUP84YDL116W GMC2Q06201 188 aa6.97□□□□□ -1.29
NUP84YDL116W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
NUP84YDL116W EFG1Q3E705 233 aaKnown RBP6.97□□□□□ -1.29
NUP84YDL116W TPK2P06245 380 aa6.96□□□□□ -1.29
NUP84YDL116W HSP60P19882 572 aaKnown RBP6.96□□□□□ -1.29
NUP84YDL116W POL4P25615 582 aa6.96□□□□□ -1.29
NUP84YDL116W SMY2P32909 740 aaKnown RBP6.96□□□□□ -1.29
NUP84YDL116W PET112P33893 541 aa6.96□□□□□ -1.29
NUP84YDL116W NOP4P37838 685 aaKnown RBP6.96□□□□□ -1.29
NUP84YDL116W ETP1P38748 585 aaKnown RBP6.96□□□□□ -1.29
NUP84YDL116W CCT7P42943 550 aaKnown RBP6.96□□□□□ -1.29
NUP84YDL116W RPS10BP46784 105 aaKnown RBP6.96□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms