RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP9	YDL030W	YCR006C	P25350	157 aa		4.61	□□□□□ -1.67
PRP9	YDL030W	DEP1	P31385	405 aa		4.61	□□□□□ -1.67
PRP9	YDL030W	ACA1	P39970	489 aa		4.61	□□□□□ -1.67
PRP9	YDL030W	YIL161W	P40449	235 aa	Known RBP	4.61	□□□□□ -1.67
PRP9	YDL030W	HYR1	P40581	163 aa	Known RBP	4.61	□□□□□ -1.67
PRP9	YDL030W	SCS3	P53012	380 aa		4.61	□□□□□ -1.67
PRP9	YDL030W	BOP3	P53958	396 aa		4.61	□□□□□ -1.67
PRP9	YDL030W	HEF3	P53978	1044 aa	Known RBP	4.61	□□□□□ -1.67
PRP9	YDL030W	UBX3	Q12229	455 aa		4.61	□□□□□ -1.67
PRP9	YDL030W	YPT1	P01123	206 aa	Known RBP	4.6	□□□□□ -1.67
PRP9	YDL030W	MRP2	P10663	115 aa	Predicted RBP	4.6	□□□□□ -1.67
PRP9	YDL030W	ATO2	P32907	282 aa		4.6	□□□□□ -1.67
PRP9	YDL030W	MPE1	P35728	441 aa	Known RBP	4.6	□□□□□ -1.67
PRP9	YDL030W	GND1	P38720	489 aa	Known RBP	4.6	□□□□□ -1.67
PRP9	YDL030W	PSF2	P40359	213 aa		4.6	□□□□□ -1.67
PRP9	YDL030W	UBP8	P50102	471 aa		4.6	□□□□□ -1.67
PRP9	YDL030W	DCP2	P53550	970 aa	Known RBP	4.6	□□□□□ -1.67
PRP9	YDL030W	UBX4	P54730	416 aa		4.6	□□□□□ -1.67
PRP9	YDL030W	VAM6	Q07468	1049 aa		4.6	□□□□□ -1.67
PRP9	YDL030W	RAD50	P12753	1312 aa		4.6	□□□□□ -1.67
PRP9	YDL030W	NCP1	P16603	691 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	SPO16	P17122	198 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	MSM1	P22438	575 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	NPR3	P38742	1146 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	RPT2	P40327	437 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	VPS25	P47142	202 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	LSC1	P53598	329 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	PIG1	Q06216	648 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	SNA4	Q07549	140 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-H	O13535	1793 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-DR5	P0C2I2	1755 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-DR6	P0C2I3	1755 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-LR2	P0C2I5	1755 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-PR2	P0C2J0	1756 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-JR1	P47098	1755 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-ER1	Q03612	1755 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-GR2	Q12269	1755 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-OL	Q12273	1755 aa		4.59	□□□□□ -1.67
PRP9	YDL030W	TY1B-PL	Q12414	1755 aa	Known RBP	4.59	□□□□□ -1.67
PRP9	YDL030W	ATP2	P00830	511 aa	Known RBP	4.58	□□□□□ -1.68
PRP9	YDL030W	TOP1	P04786	769 aa		4.58	□□□□□ -1.68
PRP9	YDL030W	PET111	P08468	800 aa		4.58	□□□□□ -1.68
PRP9	YDL030W	SWI3	P32591	825 aa		4.58	□□□□□ -1.68
PRP9	YDL030W	MRPL10	P36520	322 aa		4.58	□□□□□ -1.68
PRP9	YDL030W	YAP3	P38749	330 aa		4.58	□□□□□ -1.68
PRP9	YDL030W	SWA2	Q06677	668 aa		4.58	□□□□□ -1.68
PRP9	YDL030W	YLR049C	Q12110	428 aa		4.58	□□□□□ -1.68
PRP9	YDL030W	RNR2	P09938	399 aa	Known RBP	4.57	□□□□□ -1.68
PRP9	YDL030W	YSP3	P25036	478 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	MED8	P38304	223 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	TDA9	Q04545	1251 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	SWF1	Q04629	336 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	GSH2	Q08220	491 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	DSE3	Q08729	430 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	VMR1	P38735	1592 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	NUC1	P08466	329 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	APA1	P16550	321 aa	Known RBP	4.57	□□□□□ -1.68
PRP9	YDL030W	YCL049C	P25577	312 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	EXO84	P38261	753 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	VPS41	P38959	992 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	YGL036W	P53185	909 aa	Predicted RBP	4.57	□□□□□ -1.68
PRP9	YDL030W	MRS2	Q01926	470 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	TLG1	Q03322	224 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	NUP53	Q03790	475 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	NKP2	Q06162	153 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	SRL1	Q08673	210 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	BUD7	Q08754	746 aa		4.57	□□□□□ -1.68
PRP9	YDL030W	GPA1	P08539	472 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	PGI1	P12709	554 aa	Known RBP	4.56	□□□□□ -1.68
PRP9	YDL030W	YUR1	P26725	428 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	MRPL13	Q02204	264 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	VPS20	Q04272	221 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	BLS1	Q06071	122 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	YLR455W	Q06188	304 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	RTT109	Q07794	436 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	COX17	Q12287	69 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	LYS2	P07702	1392 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	PSK1	P31374	1356 aa		4.56	□□□□□ -1.68
PRP9	YDL030W	GEX2	P36173	615 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	ADE17	P38009	592 aa	Known RBP	4.55	□□□□□ -1.68
PRP9	YDL030W	RTT107	P38850	1070 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	STB2	P46679	850 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	ASE1	P50275	885 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	VPS72	Q03388	795 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	TAP42	Q04372	366 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	CIA1	Q05583	330 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	FRE3	Q08905	711 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	YOL087C	Q99247	1116 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	IML1	P47170	1584 aa		4.55	□□□□□ -1.68
PRP9	YDL030W	YER145C-A	A0A023PYF4	145 aa		4.54	□□□□□ -1.68
PRP9	YDL030W	TPK1	P06244	397 aa		4.54	□□□□□ -1.68
PRP9	YDL030W	RAD51	P25454	400 aa		4.54	□□□□□ -1.68
PRP9	YDL030W	UBP13	P38187	747 aa		4.54	□□□□□ -1.68
PRP9	YDL030W	RFC1	P38630	861 aa	Known RBP	4.54	□□□□□ -1.68
PRP9	YDL030W	YIL152W	P40455	235 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms