RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
SRRT-219ENST00000641476 ROBO3Q96MS0 1386 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 GRB14Q14449 540 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 CTR9Q6PD62 1173 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 TRPV1Q8NER1 839 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 APPBP2Q92624 585 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 SYMPKQ92797 1274 aaKnown RBP17.53■□□□□ 0.4
SRRT-219ENST00000641476 CCDC17Q96LX7 622 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 VCPKMTQ9H867 229 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 TMX2Q9Y320 296 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 IVNS1ABPQ9Y6Y0 642 aa17.53■□□□□ 0.4
SRRT-219ENST00000641476 SLC15A5A6NIM6 579 aa17.52■□□□□ 0.4
SRRT-219ENST00000641476 MYCNP04198 464 aaPredicted RBP17.52■□□□□ 0.4
SRRT-219ENST00000641476 PTPREP23469 700 aa17.52■□□□□ 0.4
SRRT-219ENST00000641476 RRP1P56182 461 aaKnown RBP17.52■□□□□ 0.4
SRRT-219ENST00000641476 SMAD3P84022 425 aaKnown RBP17.52■□□□□ 0.4
SRRT-219ENST00000641476 SIAH1Q8IUQ4 282 aa17.52■□□□□ 0.4
SRRT-219ENST00000641476 SPICE1Q8N0Z3 855 aa17.52■□□□□ 0.4
SRRT-219ENST00000641476 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
SRRT-219ENST00000641476 STRBPQ96SI9 672 aaKnown RBP17.52■□□□□ 0.4
SRRT-219ENST00000641476 WDR46O15213 610 aaKnown RBP17.51■□□□□ 0.39
SRRT-219ENST00000641476 COG2Q14746 738 aa17.51■□□□□ 0.39
SRRT-219ENST00000641476 TRIM60Q495X7 471 aa17.51■□□□□ 0.39
SRRT-219ENST00000641476 ANO1Q5XXA6 986 aa17.51■□□□□ 0.39
SRRT-219ENST00000641476 SLC39A5Q6ZMH5 540 aa17.51■□□□□ 0.39
SRRT-219ENST00000641476 NPLOC4Q8TAT6 608 aa17.51■□□□□ 0.39
SRRT-219ENST00000641476 MOV10L1Q9BXT6 1211 aaKnown RBP17.51■□□□□ 0.39
SRRT-219ENST00000641476 SPATC1LQ9H0A9 340 aa17.51■□□□□ 0.39
SRRT-219ENST00000641476 EPB41L4AQ9HCS5 686 aaPredicted RBP17.51■□□□□ 0.39
SRRT-219ENST00000641476 TTC41PQ6P2S7 1318 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 LTBP2Q14767 1821 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 KBTBD13C9JR72 458 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 RNF113AO15541 343 aaKnown RBP17.5■□□□□ 0.39
SRRT-219ENST00000641476 GPAA1O43292 621 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 FLOT1O75955 427 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 HOXC6P09630 235 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 CYBAP13498 195 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 EEF2P13639 858 aaKnown RBP17.5■□□□□ 0.39
SRRT-219ENST00000641476 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 ARRDC4Q8NCT1 418 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 ATG4CQ96DT6 458 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 PDLIM7Q9NR12 457 aa17.5■□□□□ 0.39
SRRT-219ENST00000641476 MYH4Q9Y623 1939 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 M0R2C6 588 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 ZFYP08048 801 aaPredicted RBP17.49■□□□□ 0.39
SRRT-219ENST00000641476 COL9A1P20849 921 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 DSG3P32926 999 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 SBK1Q52WX2 424 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 GIMAP6Q6P9H5 292 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 SHCBP1Q8NEM2 672 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 OTUD7AQ8TE49 926 aaPredicted RBP17.49■□□□□ 0.39
SRRT-219ENST00000641476 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
SRRT-219ENST00000641476 HOXC10Q9NYD6 342 aa17.49■□□□□ 0.39
SRRT-219ENST00000641476 TRIM43BA6NCK2 446 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 ERCC3P19447 782 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 RASA1P20936 1047 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 ADORA2AP29274 412 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 SAMD1Q6SPF0 538 aaPredicted RBP17.48■□□□□ 0.39
SRRT-219ENST00000641476 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 TRIM43Q96BQ3 446 aaPredicted RBP17.48■□□□□ 0.39
SRRT-219ENST00000641476 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.48■□□□□ 0.39
SRRT-219ENST00000641476 KANSL2Q9H9L4 492 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 TTC28Q96AY4 2481 aa17.48■□□□□ 0.39
SRRT-219ENST00000641476 ERC2O15083 957 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 ADCYAP1R1P41586 468 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 TDO2P48775 406 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 PLS1Q14651 629 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 SNX17Q15036 470 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 DPP9Q86TI2 863 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 STK11IPQ8N1F8 1099 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 RNPC3Q96LT9 517 aaKnown RBP17.47■□□□□ 0.39
SRRT-219ENST00000641476 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 MUC3AQ02505 3323 aa17.47■□□□□ 0.39
SRRT-219ENST00000641476 MINDY4BA8MYZ0 360 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 GNAT2P19087 354 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 MX1P20591 662 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 TJAP1Q5JTD0 557 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 USP38Q8NB14 1042 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 CRBNQ96SW2 442 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 FSD1Q9BTV5 496 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 FBXO28Q9NVF7 368 aa17.46■□□□□ 0.39
SRRT-219ENST00000641476 SALL3Q9BXA9 1300 aa17.46■□□□□ 0.38
SRRT-219ENST00000641476 TNFRSF10AO00220 468 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 RAD21O60216 631 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 IGHA2P01877 340 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 TMEM132BQ14DG7 1078 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 LRRFIP1Q32MZ4 808 aaKnown RBP17.45■□□□□ 0.38
SRRT-219ENST00000641476 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 OLFML2BQ68BL8 750 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 NCAPG2Q86XI2 1143 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 MROH8Q9H579 483 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 MKNK2Q9HBH9 465 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
SRRT-219ENST00000641476 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 TMEM265A0A087WTH1 108 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 SEPT4O43236 478 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms