RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 PCDHB6Q9Y5E3 794 aa9.48□□□□□ -0.89
PNKP-231ENST00000640501 ESYT2A0FGR8 921 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 MPHOSPH10O00566 681 aaKnown RBP9.47□□□□□ -0.89
PNKP-231ENST00000640501 PPIP5K2O43314 1243 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 ENTPD3O75355 529 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 NOVP48745 357 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 ZNF75DP51815 510 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 GSDMDP57764 484 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 ATP2C1P98194 919 aaPredicted RBP9.47□□□□□ -0.89
PNKP-231ENST00000640501 MYL5Q02045 173 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 GABPAQ06546 454 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 IQCB1Q15051 598 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 POSTNQ15063 836 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 EZH2Q15910 746 aaKnown RBP9.47□□□□□ -0.89
PNKP-231ENST00000640501 CDC42EP5Q6NZY7 148 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 PIK3AP1Q6ZUJ8 805 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 PLA2G4DQ86XP0 818 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 TTLL6Q8N841 843 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 IQUBQ8NA54 791 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 OXER1Q8TDS5 423 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 CCDC47Q96A33 483 aaKnown RBP9.47□□□□□ -0.89
PNKP-231ENST00000640501 CEP95Q96GE4 821 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 PSMD1Q99460 953 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 IDI2Q9BXS1 227 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 DBNDD1Q9H9R9 158 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 RMND1Q9NWS8 449 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 IMPACTQ9P2X3 320 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
PNKP-231ENST00000640501 POLR2DO15514 142 aaKnown RBP9.46□□□□□ -0.9
PNKP-231ENST00000640501 MYL1P05976 194 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 PRPHP41219 470 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 SCNN1DP51172 638 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 EN1Q05925 392 aaPredicted RBP9.46□□□□□ -0.9
PNKP-231ENST00000640501 PTGDRQ13258 359 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 NONOQ15233 471 aaKnown RBP eCLIP9.46□□□□□ -0.9
PNKP-231ENST00000640501 DACT2Q5SW24 774 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 DTHD1Q6ZMT9 781 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 C11orf57Q6ZUT1 292 aaPredicted RBP9.46□□□□□ -0.9
PNKP-231ENST00000640501 CCDC125Q86Z20 511 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 TEX2Q8IWB9 1127 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.9
PNKP-231ENST00000640501 CERS5Q8N5B7 392 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 AOPEPQ8N6M6 819 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 SLC44A5Q8NCS7 719 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 TNFRSF25Q93038 417 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 AK8Q96MA6 479 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 CLIC6Q96NY7 704 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 RAB34Q9BZG1 259 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 ZMYND12Q9H0C1 365 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 CSRNP2Q9H175 543 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 KANSL2Q9H9L4 492 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 MAGEF1Q9HAY2 307 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 RRAGDQ9NQL2 400 aaPredicted RBP9.46□□□□□ -0.9
PNKP-231ENST00000640501 CLIP2Q9UDT6 1046 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 PSME4Q14997 1843 aa9.46□□□□□ -0.9
PNKP-231ENST00000640501 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 hCG_1642624A0A1W2PR95 340 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 VWA3AA6NCI4 1184 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 SMCO2A6NFE2 343 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 UBE2Q2LH0YL09 131 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 SMIM22K7EJ46 135 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 STXBP3O00186 592 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 SLFN14P0C7P3 912 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 HOXA7P31268 230 aaPredicted RBP9.45□□□□□ -0.9
PNKP-231ENST00000640501 MRPL12P52815 198 aaKnown RBP9.45□□□□□ -0.9
PNKP-231ENST00000640501 ZNF174Q15697 407 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 LONRF3Q496Y0 759 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 NT5DC1Q5TFE4 455 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 WWC2Q6AWC2 1192 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 APOBEC3HQ6NTF7 200 aaKnown RBP9.45□□□□□ -0.9
PNKP-231ENST00000640501 TMEM179Q6ZVK1 233 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 KIAA0825Q8IV33 1275 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 REXO1Q8N1G1 1221 aaKnown RBP9.45□□□□□ -0.9
PNKP-231ENST00000640501 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 RASSF8Q8NHQ8 419 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 DCAF4Q8WV16 495 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 GSDMAQ96QA5 445 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 CUEDC2Q9H467 287 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 RIOX1Q9H6W3 641 aa9.45□□□□□ -0.9
PNKP-231ENST00000640501 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
PNKP-231ENST00000640501 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
PNKP-231ENST00000640501 IGKV6D-41A0A0C4DH26 115 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 PNMA6FA0A0J9YX94 578 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 SNHG28P0DPA3 235 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 PDHBP11177 359 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 POLD1P28340 1107 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 ERCC5P28715 1186 aaPredicted RBP9.44□□□□□ -0.9
PNKP-231ENST00000640501 CHRNA5P30532 468 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 MCM7P33993 719 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 UBA7P41226 1012 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 ADCY7P51828 1080 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 TERF1P54274 439 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 PNOCQ13519 176 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 AOC3Q16853 763 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 CCDC96Q2M329 555 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 TMEM266Q2M3C6 531 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 DPCR1Q3MIW9 517 aa9.44□□□□□ -0.9
PNKP-231ENST00000640501 CERKLQ49MI3 558 aaPredicted RBP9.44□□□□□ -0.9
PNKP-231ENST00000640501 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms