RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 OLFML2BQ68BL8 750 aa23.99■■□□□ 1.43
CLN6-222ENST00000637667 ABRAQ8N0Z2 381 aa23.99■■□□□ 1.43
CLN6-222ENST00000637667 NYAP2Q9P242 653 aa23.99■■□□□ 1.43
CLN6-222ENST00000637667 PPP1R9AQ9ULJ8 1098 aa23.99■■□□□ 1.43
CLN6-222ENST00000637667 PFASO15067 1338 aa23.99■■□□□ 1.43
CLN6-222ENST00000637667 COBLO75128 1261 aa23.98■■□□□ 1.43
CLN6-222ENST00000637667 COL6A1P12109 1028 aa23.98■■□□□ 1.43
CLN6-222ENST00000637667 ZMYM1Q5SVZ6 1142 aa23.98■■□□□ 1.43
CLN6-222ENST00000637667 IFNL3Q8IZI9 196 aa23.98■■□□□ 1.43
CLN6-222ENST00000637667 SEC62Q99442 399 aaKnown RBP23.98■■□□□ 1.43
CLN6-222ENST00000637667 NACAP1Q9BZK3 213 aa23.98■■□□□ 1.43
CLN6-222ENST00000637667 ZNF287Q9HBT7 754 aa23.98■■□□□ 1.43
CLN6-222ENST00000637667 SLC5A4Q9NY91 659 aa23.98■■□□□ 1.43
CLN6-222ENST00000637667 ZBTB47Q9UFB7 747 aaPredicted RBP23.98■■□□□ 1.43
CLN6-222ENST00000637667 DDX20Q9UHI6 824 aaKnown RBP23.98■■□□□ 1.43
CLN6-222ENST00000637667 MSCO60682 206 aa23.97■■□□□ 1.43
CLN6-222ENST00000637667 SLC25A27O95847 323 aa23.97■■□□□ 1.43
CLN6-222ENST00000637667 CNGA1P29973 690 aa23.97■■□□□ 1.43
CLN6-222ENST00000637667 ANKRD45Q5TZF3 282 aa23.97■■□□□ 1.43
CLN6-222ENST00000637667 TRPV1Q8NER1 839 aa23.97■■□□□ 1.43
CLN6-222ENST00000637667 SALL3Q9BXA9 1300 aa23.97■■□□□ 1.43
CLN6-222ENST00000637667 ALPK3Q96L96 1907 aa23.96■■□□□ 1.43
CLN6-222ENST00000637667 IGKV6D-41A0A0C4DH26 115 aa23.96■■□□□ 1.43
CLN6-222ENST00000637667 VWA5AO00534 786 aa23.96■■□□□ 1.43
CLN6-222ENST00000637667 PRDM1O75626 825 aa23.96■■□□□ 1.43
CLN6-222ENST00000637667 FCER1AP12319 257 aa23.96■■□□□ 1.43
CLN6-222ENST00000637667 CYBAP13498 195 aa23.96■■□□□ 1.43
CLN6-222ENST00000637667 ZNF444Q8N0Y2 327 aaPredicted RBP23.96■■□□□ 1.43
CLN6-222ENST00000637667 ZMYND8Q9ULU4 1186 aaPredicted RBP23.96■■□□□ 1.43
CLN6-222ENST00000637667 ZNF236Q9UL36 1845 aa23.96■■□□□ 1.43
CLN6-222ENST00000637667 GREB1LQ9C091 1923 aaPredicted RBP23.95■■□□□ 1.42
CLN6-222ENST00000637667 F5H6K3 240 aa23.95■■□□□ 1.42
CLN6-222ENST00000637667 NDUFB10O96000 172 aa23.95■■□□□ 1.42
CLN6-222ENST00000637667 KLRC3Q07444 240 aa23.95■■□□□ 1.42
CLN6-222ENST00000637667 HDAC1Q13547 482 aaPredicted RBP23.95■■□□□ 1.42
CLN6-222ENST00000637667 RIOX2Q8IUF8 465 aa23.95■■□□□ 1.42
CLN6-222ENST00000637667 NUP88Q99567 741 aaPredicted RBP23.95■■□□□ 1.42
CLN6-222ENST00000637667 STAP2Q9UGK3 403 aa23.95■■□□□ 1.42
CLN6-222ENST00000637667 STAT3P40763 770 aa23.94■■□□□ 1.42
CLN6-222ENST00000637667 REPS2Q8NFH8 660 aa23.94■■□□□ 1.42
CLN6-222ENST00000637667 SLF1Q9BQI6 1058 aa23.94■■□□□ 1.42
CLN6-222ENST00000637667 NAPBQ9H115 298 aa23.94■■□□□ 1.42
CLN6-222ENST00000637667 CLIP2Q9UDT6 1046 aa23.94■■□□□ 1.42
CLN6-222ENST00000637667 ZNF214Q9UL59 606 aaPredicted RBP23.94■■□□□ 1.42
CLN6-222ENST00000637667 A0A1W2PPC1 479 aa23.93■■□□□ 1.42
CLN6-222ENST00000637667 COPB2P35606 906 aa23.93■■□□□ 1.42
CLN6-222ENST00000637667 CEP95Q96GE4 821 aa23.93■■□□□ 1.42
CLN6-222ENST00000637667 MMP19Q99542 508 aa23.93■■□□□ 1.42
CLN6-222ENST00000637667 MTMR4Q9NYA4 1195 aa23.93■■□□□ 1.42
CLN6-222ENST00000637667 PARP14Q460N5 1801 aa23.92■■□□□ 1.42
CLN6-222ENST00000637667 SLC3A2P08195 630 aaKnown RBP23.92■■□□□ 1.42
CLN6-222ENST00000637667 PDE4BQ07343 736 aa23.92■■□□□ 1.42
CLN6-222ENST00000637667 MKL1Q969V6 931 aa23.92■■□□□ 1.42
CLN6-222ENST00000637667 MAML3Q96JK9 1138 aa23.92■■□□□ 1.42
CLN6-222ENST00000637667 YTHDC1Q96MU7 727 aaKnown RBP23.92■■□□□ 1.42
CLN6-222ENST00000637667 GDF15Q99988 308 aa23.92■■□□□ 1.42
CLN6-222ENST00000637667 SYN1P17600 705 aa23.91■■□□□ 1.42
CLN6-222ENST00000637667 PPARAQ07869 468 aa23.91■■□□□ 1.42
CLN6-222ENST00000637667 LRRC26Q2I0M4 334 aa23.91■■□□□ 1.42
CLN6-222ENST00000637667 NEDD1Q8NHV4 660 aa23.91■■□□□ 1.42
CLN6-222ENST00000637667 EVI5LQ96CN4 794 aa23.91■■□□□ 1.42
CLN6-222ENST00000637667 SYNPO2Q9UMS6 1093 aa23.91■■□□□ 1.42
CLN6-222ENST00000637667 PLIN4Q96Q06 1357 aa23.91■■□□□ 1.42
CLN6-222ENST00000637667 SEPT4O43236 478 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 TTLL1O95922 423 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 TSPY3P0CV98 308 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 TSPY8P0CW00 308 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 PDE1AP54750 535 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 KCTD2Q14681 263 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 CCDC129Q6ZRS4 1044 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 TEX13BQ9BXU2 312 aa23.9■■□□□ 1.42
CLN6-222ENST00000637667 DNM1LO00429 736 aa23.89■■□□□ 1.41
CLN6-222ENST00000637667 FOXP2O15409 715 aa23.89■■□□□ 1.41
CLN6-222ENST00000637667 PGK2P07205 417 aa23.89■■□□□ 1.41
CLN6-222ENST00000637667 FAM47AQ5JRC9 791 aa23.89■■□□□ 1.41
CLN6-222ENST00000637667 PRAMEF19Q5SWL8 479 aa23.89■■□□□ 1.41
CLN6-222ENST00000637667 LRRC47Q8N1G4 583 aaKnown RBP23.89■■□□□ 1.41
CLN6-222ENST00000637667 PRPF38AQ8NAV1 312 aaKnown RBP23.89■■□□□ 1.41
CLN6-222ENST00000637667 SENP6Q9GZR1 1112 aaPredicted RBP23.89■■□□□ 1.41
CLN6-222ENST00000637667 BMP8BP34820 402 aa23.88■■□□□ 1.41
CLN6-222ENST00000637667 TFAP4Q01664 338 aa23.88■■□□□ 1.41
CLN6-222ENST00000637667 ANO1Q5XXA6 986 aa23.88■■□□□ 1.41
CLN6-222ENST00000637667 GMCL1P1Q8NEA9 526 aa23.88■■□□□ 1.41
CLN6-222ENST00000637667 DIS3Q9Y2L1 958 aaKnown RBP23.88■■□□□ 1.41
CLN6-222ENST00000637667 MAGEA10P43363 369 aaPredicted RBP23.87■■□□□ 1.41
CLN6-222ENST00000637667 AAMPQ13685 434 aa23.87■■□□□ 1.41
CLN6-222ENST00000637667 ZNF792Q3KQV3 632 aa23.87■■□□□ 1.41
CLN6-222ENST00000637667 SNRNP48Q6IEG0 339 aaKnown RBP23.87■■□□□ 1.41
CLN6-222ENST00000637667 ARRDC4Q8NCT1 418 aa23.87■■□□□ 1.41
CLN6-222ENST00000637667 NRBP1Q9UHY1 535 aa23.87■■□□□ 1.41
CLN6-222ENST00000637667 FEM1BQ9UK73 627 aa23.87■■□□□ 1.41
CLN6-222ENST00000637667 COL11A1P12107 1806 aaPredicted RBP23.87■■□□□ 1.41
CLN6-222ENST00000637667 ZBED4O75132 1171 aa23.86■■□□□ 1.41
CLN6-222ENST00000637667 GJC2Q5T442 439 aaPredicted RBP23.86■■□□□ 1.41
CLN6-222ENST00000637667 SLFN13Q68D06 897 aa23.86■■□□□ 1.41
CLN6-222ENST00000637667 KIFC2Q96AC6 838 aa23.86■■□□□ 1.41
CLN6-222ENST00000637667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.86■■□□□ 1.417e-6■■■■■ 33.6
CLN6-222ENST00000637667 CTDP1Q9Y5B0 961 aaPredicted RBP23.86■■□□□ 1.41
CLN6-222ENST00000637667 FRMPD3Q5JV73 1810 aa23.86■■□□□ 1.41
CLN6-222ENST00000637667 ATP2A1O14983 1001 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms