RNA–Protein interactions for RNA: ENST00000630147.1

SPTAN1-220, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-220ENST00000630147 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 MMP19Q99542 508 aa12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 DNAJC2Q99543 621 aaKnown RBP12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 ARMT1Q9H993 441 aa12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 TMEM39AQ9NV64 488 aa12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 PHF24Q9UPV7 400 aa12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 MCM3APO60318 1980 aa12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 GBF1Q92538 1859 aa12.74□□□□□ -0.37
SPTAN1-220ENST00000630147 ZNF532Q9HCE3 1301 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 STRNO43815 780 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 PDE6AP16499 860 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 DNAJB2P25686 324 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 ICA1Q05084 483 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 SLC9C2Q5TAH2 1124 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 ZKSCAN2Q63HK3 967 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 SIAH1Q8IUQ4 282 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 CRNKL1Q9BZJ0 848 aaKnown RBP12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 MROH8Q9H579 483 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 SLC5A4Q9NY91 659 aa12.73□□□□□ -0.37
SPTAN1-220ENST00000630147 MYADML2A6NDP7 307 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 GOLIM4O00461 696 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 CHGBP05060 677 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 RLBP1P12271 317 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 COL9A1P20849 921 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 PBX2P40425 430 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 RNF180Q86T96 592 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 DCP1AQ9NPI6 582 aaPredicted RBP12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 NOP58Q9Y2X3 529 aaKnown RBP12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 TACC3Q9Y6A5 838 aa12.72□□□□□ -0.37
SPTAN1-220ENST00000630147 KIAA0355O15063 1070 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 KCTD2Q14681 263 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 CCDC85BQ15834 202 aaPredicted RBP12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 CCDC129Q6ZRS4 1044 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 MB21D1Q8N884 522 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 TIFAQ96CG3 184 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 NUP88Q99567 741 aaPredicted RBP12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 TINF2Q9BSI4 451 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 ZNF576Q9H609 170 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 VCPKMTQ9H867 229 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
SPTAN1-220ENST00000630147 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 MBD4O95243 580 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 ZNF865P0CJ78 1059 aaPredicted RBP12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 ACRP10323 421 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 EEF2P13639 858 aaKnown RBP12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 ACLYP53396 1101 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 ZNF792Q3KQV3 632 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 TJAP1Q5JTD0 557 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 FAM83BQ5T0W9 1011 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 C1orf53Q5VUE5 145 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 PPP1R12CQ9BZL4 782 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 PRDM12Q9H4Q4 367 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 TMX2Q9Y320 296 aa12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 TCF20Q9UGU0 1960 aaKnown RBP12.7□□□□□ -0.38
SPTAN1-220ENST00000630147 MYH7P12883 1935 aa12.69□□□□□ -0.38
SPTAN1-220ENST00000630147 TCRBV5S4A2TA0A5A2 114 aa12.69□□□□□ -0.38
SPTAN1-220ENST00000630147 TNFRSF10AO00220 468 aa12.69□□□□□ -0.38
SPTAN1-220ENST00000630147 WDR46O15213 610 aaKnown RBP12.69□□□□□ -0.38
SPTAN1-220ENST00000630147 AKR1A1P14550 325 aa12.69□□□□□ -0.38
SPTAN1-220ENST00000630147 CEP85Q6P2H3 762 aa12.69□□□□□ -0.38
SPTAN1-220ENST00000630147 ABRAQ8N0Z2 381 aa12.69□□□□□ -0.38
SPTAN1-220ENST00000630147 TMEM265A0A087WTH1 108 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 DCDC2CA8MYV0 355 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 ADCY6O43306 1168 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 SLC25A27O95847 323 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 CSF2RAP15509 400 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 STAT3P40763 770 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 CDK8P49336 464 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 KCNA10Q16322 511 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 C16orf59Q7L2K0 433 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 VTI1AQ96AJ9 217 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 PBX4Q9BYU1 374 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 SWAP70Q9UH65 585 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
SPTAN1-220ENST00000630147 VWA5AO00534 786 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 IGFBP4P22692 258 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 PTGS1P23219 599 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 RHPN1Q8TCX5 695 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 GAS2L1Q99501 681 aaPredicted RBP12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 ZNF214Q9UL59 606 aaPredicted RBP12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 PPP1R9AQ9ULJ8 1098 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 RIPK3Q9Y572 518 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 NCOR1O75376 2440 aa12.67□□□□□ -0.38
SPTAN1-220ENST00000630147 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms