RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CNTNAP5Q8WYK1 1306 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 hCG_1642624A0A1W2PR95 340 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 H3BQV1 296 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 NDUFB10O96000 172 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 MAP3K9P80192 1104 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 ZNF543Q08ER8 600 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 CPVLQ9H3G5 476 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 ZNF408Q9H9D4 720 aa20.35■□□□□ 0.85
SREK1-216ENST00000612404 WDR33Q9C0J8 1336 aaKnown RBP20.34■□□□□ 0.85
SREK1-216ENST00000612404 DEXIO95424 95 aa20.34■□□□□ 0.85
SREK1-216ENST00000612404 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
SREK1-216ENST00000612404 WASF1Q92558 559 aa20.34■□□□□ 0.85
SREK1-216ENST00000612404 AIFM3Q96NN9 605 aa20.34■□□□□ 0.85
SREK1-216ENST00000612404 ALG1Q9BT22 464 aa20.34■□□□□ 0.85
SREK1-216ENST00000612404 UBA5Q9GZZ9 404 aa20.34■□□□□ 0.85
SREK1-216ENST00000612404 CSADQ9Y600 493 aa20.34■□□□□ 0.85
SREK1-216ENST00000612404 PRPF3O43395 683 aaKnown RBP20.33■□□□□ 0.85
SREK1-216ENST00000612404 PTPRAP18433 802 aa20.33■□□□□ 0.85
SREK1-216ENST00000612404 GMCL1Q96IK5 515 aa20.33■□□□□ 0.85
SREK1-216ENST00000612404 NUP88Q99567 741 aaPredicted RBP20.33■□□□□ 0.85
SREK1-216ENST00000612404 ZDHHC9Q9Y397 364 aa20.33■□□□□ 0.85
SREK1-216ENST00000612404 MYH6P13533 1939 aa20.33■□□□□ 0.85
SREK1-216ENST00000612404 FMR1Q06787 632 aaKnown RBP eCLIP20.33■□□□□ 0.847e-11■■■■■ 47.5
SREK1-216ENST00000612404 VGLL4Q14135 290 aa20.33■□□□□ 0.84
SREK1-216ENST00000612404 NOL9Q5SY16 702 aaKnown RBP20.33■□□□□ 0.84
SREK1-216ENST00000612404 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.33■□□□□ 0.84
SREK1-216ENST00000612404 MOB2Q70IA6 237 aa20.33■□□□□ 0.84
SREK1-216ENST00000612404 C8orf76Q96K31 380 aa20.33■□□□□ 0.84
SREK1-216ENST00000612404 ZHX2Q9Y6X8 837 aa20.33■□□□□ 0.84
SREK1-216ENST00000612404 BRD1O95696 1058 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 GUCY1B3Q02153 619 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 AS3MTQ9HBK9 375 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 VAT1LQ9HCJ6 419 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 MTMR6Q9Y217 621 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 CYTH3O43739 400 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 PDIA4P13667 645 aaKnown RBP20.32■□□□□ 0.84
SREK1-216ENST00000612404 SLC35G1Q2M3R5 365 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 KIAA1755Q5JYT7 1200 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 TTBK2Q6IQ55 1244 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 ARMC9Q7Z3E5 817 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 SPZ1Q9BXG8 430 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 VCPKMTQ9H867 229 aa20.32■□□□□ 0.84
SREK1-216ENST00000612404 ZSCAN22P10073 491 aaPredicted RBP20.31■□□□□ 0.84
SREK1-216ENST00000612404 BMP3P12645 472 aa20.31■□□□□ 0.84
SREK1-216ENST00000612404 SLC16A2P36021 539 aa20.31■□□□□ 0.84
SREK1-216ENST00000612404 SPP2Q13103 211 aa20.31■□□□□ 0.84
SREK1-216ENST00000612404 GJB4Q9NTQ9 266 aa20.31■□□□□ 0.84
SREK1-216ENST00000612404 SNCAIPQ9Y6H5 919 aa20.31■□□□□ 0.84
SREK1-216ENST00000612404 TRIM75PA6NK02 468 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 USP17L10C9JJH3 530 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 IKQ13123 557 aaPredicted RBP20.3■□□□□ 0.84
SREK1-216ENST00000612404 MTMR2Q13614 643 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 TRIM29Q14134 588 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 OTUD7BQ6GQQ9 843 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 ZNF280CQ8ND82 737 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 RBM27Q9P2N5 1060 aaKnown RBP20.3■□□□□ 0.84
SREK1-216ENST00000612404 OTOFQ9HC10 1997 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 PKN1Q16512 942 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 HOMER1Q86YM7 354 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 ANKRD13AQ8IZ07 590 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 TNPO1Q92973 898 aaKnown RBP20.3■□□□□ 0.84
SREK1-216ENST00000612404 WDR18Q9BV38 432 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 KIAA1683Q9H0B3 1180 aa20.3■□□□□ 0.84
SREK1-216ENST00000612404 GPBP1L1Q9HC44 474 aaPredicted RBP20.3■□□□□ 0.84
SREK1-216ENST00000612404 TMEM232C9JQI7 657 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 SMARCA1P28370 1054 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 FAM83BQ5T0W9 1011 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 RRP36Q96EU6 259 aaKnown RBP20.29■□□□□ 0.84
SREK1-216ENST00000612404 MCTP1Q6DN14 999 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 FERMT3Q86UX7 667 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 ADGRF4Q8IZF3 695 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 CLMNQ96JQ2 1002 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 RIOX1Q9H6W3 641 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 ELP3Q9H9T3 547 aa20.29■□□□□ 0.84
SREK1-216ENST00000612404 SEC63Q9UGP8 760 aaKnown RBP20.29■□□□□ 0.84
SREK1-216ENST00000612404 SCG2P13521 617 aa20.28■□□□□ 0.84
SREK1-216ENST00000612404 USP14P54578 494 aa20.28■□□□□ 0.84
SREK1-216ENST00000612404 BACE1P56817 501 aa20.28■□□□□ 0.84
SREK1-216ENST00000612404 DGKZQ13574 1117 aa20.28■□□□□ 0.84
SREK1-216ENST00000612404 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
SREK1-216ENST00000612404 CHADLQ6NUI6 762 aa20.28■□□□□ 0.84
SREK1-216ENST00000612404 PIGSQ96S52 555 aa20.28■□□□□ 0.84
SREK1-216ENST00000612404 F13A1P00488 732 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 XBP1P17861 261 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 PFKFB3Q16875 520 aaPredicted RBP20.27■□□□□ 0.84
SREK1-216ENST00000612404 PAPPA2Q9BXP8 1791 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 FOXD4L6Q3SYB3 417 aaPredicted RBP20.27■□□□□ 0.84
SREK1-216ENST00000612404 KRT40Q6A162 431 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 FOXD4L3Q6VB84 417 aaPredicted RBP20.27■□□□□ 0.84
SREK1-216ENST00000612404 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 LPAR1Q92633 364 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 JMJD4Q9H9V9 463 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 VPS54Q9P1Q0 977 aa20.27■□□□□ 0.84
SREK1-216ENST00000612404 PHIPQ8WWQ0 1821 aa20.26■□□□□ 0.83
SREK1-216ENST00000612404 CELF2O95319 508 aaKnown RBP20.26■□□□□ 0.83
SREK1-216ENST00000612404 STAT2P52630 851 aa20.26■□□□□ 0.83
SREK1-216ENST00000612404 GPKOWQ92917 476 aaPredicted RBP eCLIP20.26■□□□□ 0.839e-8■■■□□ 15.2
SREK1-216ENST00000612404 AFG3L2Q9Y4W6 797 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms