RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 GALNT17Q6IS24 598 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 DAGLBQ8NCG7 672 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 SPZ1Q9BXG8 430 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 IMPACTQ9P2X3 320 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 TTF2Q9UNY4 1162 aaKnown RBP31.98■■■□□ 2.71
CSPG5-205ENST00000610462 A0A087X0B3 334 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 KLRF2D3W0D1 207 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 F8W031 263 aaPredicted RBP31.98■■■□□ 2.71
CSPG5-205ENST00000610462 LMOD1P29536 600 aaPredicted RBP31.98■■■□□ 2.71
CSPG5-205ENST00000610462 TYW1BQ6NUM6 668 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 GRAMD1CQ8IYS0 662 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 DHX58Q96C10 678 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 CEP95Q96GE4 821 aa31.98■■■□□ 2.71
CSPG5-205ENST00000610462 M0R2N6 131 aa31.97■■■□□ 2.71
CSPG5-205ENST00000610462 MORC3Q14149 939 aa31.97■■■□□ 2.71
CSPG5-205ENST00000610462 SPATA20Q8TB22 786 aa31.97■■■□□ 2.71
CSPG5-205ENST00000610462 BARHL2Q9NY43 387 aa31.97■■■□□ 2.71
CSPG5-205ENST00000610462 VWA3AA6NCI4 1184 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 STXBP3O00186 592 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 MYO1BO43795 1136 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 PARP1P09874 1014 aaKnown RBP31.96■■■□□ 2.71
CSPG5-205ENST00000610462 SLFN14P0C7P3 912 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 FANCCQ00597 558 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 PICALMQ13492 652 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 FILIP1Q7Z7B0 1213 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 MLKLQ8NB16 471 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 PLIN4Q96Q06 1357 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 GOLGA8HP0CJ92 632 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 OSBPL5Q9H0X9 879 aaPredicted RBP31.96■■■□□ 2.71
CSPG5-205ENST00000610462 DACH1Q9UI36 760 aa31.96■■■□□ 2.71
CSPG5-205ENST00000610462 MCM7P33993 719 aa31.95■■■□□ 2.71
CSPG5-205ENST00000610462 GSDMDP57764 484 aa31.95■■■□□ 2.71
CSPG5-205ENST00000610462 GABPAQ06546 454 aa31.95■■■□□ 2.71
CSPG5-205ENST00000610462 HEATR3Q7Z4Q2 680 aa31.95■■■□□ 2.71
CSPG5-205ENST00000610462 ADAMTSL1Q8N6G6 1762 aa31.95■■■□□ 2.7
CSPG5-205ENST00000610462 G3V3G9 751 aa31.95■■■□□ 2.7
CSPG5-205ENST00000610462 DCAF8Q5TAQ9 597 aa31.95■■■□□ 2.7
CSPG5-205ENST00000610462 SH3RF1Q7Z6J0 888 aa31.95■■■□□ 2.7
CSPG5-205ENST00000610462 TNS1Q9HBL0 1735 aaKnown RBP31.94■■■□□ 2.7
CSPG5-205ENST00000610462 SMARCA1P28370 1054 aa31.94■■■□□ 2.7
CSPG5-205ENST00000610462 ARID5BQ14865 1188 aa31.94■■■□□ 2.7
CSPG5-205ENST00000610462 MXD3Q9BW11 206 aa31.94■■■□□ 2.7
CSPG5-205ENST00000610462 ARL6IP4Q66PJ3 421 aaKnown RBP31.93■■■□□ 2.7
CSPG5-205ENST00000610462 MSL1Q68DK7 614 aa31.93■■■□□ 2.7
CSPG5-205ENST00000610462 ZNF622Q969S3 477 aaKnown RBP eCLIP31.93■■■□□ 2.7
CSPG5-205ENST00000610462 DDX4Q9NQI0 724 aaKnown RBP31.93■■■□□ 2.7
CSPG5-205ENST00000610462 USP40Q9NVE5 1235 aa31.93■■■□□ 2.7
CSPG5-205ENST00000610462 PCDHA6Q9UN73 950 aa31.93■■■□□ 2.7
CSPG5-205ENST00000610462 PCDHA8Q9Y5H6 950 aa31.93■■■□□ 2.7
CSPG5-205ENST00000610462 HHIPL2Q6UWX4 724 aa31.93■■■□□ 2.7
CSPG5-205ENST00000610462 PAGE5Q96GU1 130 aa31.93■■■□□ 2.7
CSPG5-205ENST00000610462 RGPD3A6NKT7 1758 aaPredicted RBP31.92■■■□□ 2.7
CSPG5-205ENST00000610462 RGPD4Q7Z3J3 1758 aa31.92■■■□□ 2.7
CSPG5-205ENST00000610462 CCDC194A0A1B0GVG4 234 aa31.92■■■□□ 2.7
CSPG5-205ENST00000610462 ATP1A3P13637 1013 aa31.92■■■□□ 2.7
CSPG5-205ENST00000610462 RASGRP2Q7LDG7 609 aa31.92■■■□□ 2.7
CSPG5-205ENST00000610462 C4orf32Q8N8J7 132 aa31.92■■■□□ 2.7
CSPG5-205ENST00000610462 RASGRP4Q8TDF6 673 aa31.92■■■□□ 2.7
CSPG5-205ENST00000610462 USP17L2Q6R6M4 530 aa31.91■■■□□ 2.7
CSPG5-205ENST00000610462 IL17AQ16552 155 aa31.91■■■□□ 2.7
CSPG5-205ENST00000610462 CBFA2T2O43439 604 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 SCNN1DP51172 638 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 C2CD5Q86YS7 1000 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 TEKT1Q969V4 418 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 PYM1Q9BRP8 204 aaKnown RBP31.9■■■□□ 2.7
CSPG5-205ENST00000610462 FANCLQ9NW38 375 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 TMC6Q7Z403 805 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 PODNQ7Z5L7 613 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 CCDC12Q8WUD4 166 aaPredicted RBP31.9■■■□□ 2.7
CSPG5-205ENST00000610462 PRIMPOLQ96LW4 560 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 MTMR4Q9NYA4 1195 aa31.9■■■□□ 2.7
CSPG5-205ENST00000610462 CDC42EP5Q6NZY7 148 aa31.89■■■□□ 2.7
CSPG5-205ENST00000610462 RRP36Q96EU6 259 aaKnown RBP31.89■■■□□ 2.7
CSPG5-205ENST00000610462 ZMYND12Q9H0C1 365 aa31.89■■■□□ 2.7
CSPG5-205ENST00000610462 CPVLQ9H3G5 476 aa31.89■■■□□ 2.7
CSPG5-205ENST00000610462 SWAP70Q9UH65 585 aa31.89■■■□□ 2.7
CSPG5-205ENST00000610462 LONP1P36776 959 aaKnown RBP31.88■■■□□ 2.69
CSPG5-205ENST00000610462 AFMP43652 599 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 CCZ1BP86790 482 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 CCZ1P86791 482 aaPredicted RBP31.88■■■□□ 2.69
CSPG5-205ENST00000610462 STYK1Q6J9G0 422 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 ENOX1Q8TC92 643 aaKnown RBP31.88■■■□□ 2.69
CSPG5-205ENST00000610462 MYO3BQ8WXR4 1341 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 UQCRHLA0A096LP55 91 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 IGKV6D-41A0A0C4DH26 115 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 SERPINC1P01008 464 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 UQCRHP07919 91 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 UBASH3AP57075 661 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 DHX8Q14562 1220 aaKnown RBP31.88■■■□□ 2.69
CSPG5-205ENST00000610462 SERPINB13Q9UIV8 391 aa31.88■■■□□ 2.69
CSPG5-205ENST00000610462 SKILP12757 684 aa31.87■■■□□ 2.69
CSPG5-205ENST00000610462 AKR1B1P15121 316 aa31.87■■■□□ 2.69
CSPG5-205ENST00000610462 E2F4Q16254 413 aa31.87■■■□□ 2.69
CSPG5-205ENST00000610462 IQUBQ8NA54 791 aa31.87■■■□□ 2.69
CSPG5-205ENST00000610462 USP17L5A8MUK1 530 aa31.87■■■□□ 2.69
CSPG5-205ENST00000610462 NAPAP54920 295 aa31.87■■■□□ 2.69
CSPG5-205ENST00000610462 DPYDQ12882 1025 aa31.87■■■□□ 2.69
CSPG5-205ENST00000610462 CT47A1Q5JQC4 288 aaPredicted RBP31.87■■■□□ 2.69
CSPG5-205ENST00000610462 APOBEC3HQ6NTF7 200 aaKnown RBP31.87■■■□□ 2.69
CSPG5-205ENST00000610462 CCDC150Q8NCX0 1101 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms