RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 NEK1Q96PY6 1258 aa18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 RPAP3Q9H6T3 665 aaPredicted RBP18.8■□□□□ 0.6
CSNK1D-223ENST00000584472 WDR46O15213 610 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 KDM4AO75164 1064 aa18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 FCGRTP55899 365 aa18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 COL9A3Q14050 684 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 KIAA1755Q5JYT7 1200 aa18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 MB21D2Q8IYB1 491 aaPredicted RBP18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 JAKMIP1Q96N16 626 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 P2RX7Q99572 595 aaKnown RBP18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 ARHGAP39Q9C0H5 1083 aa18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 ZSWIM5Q9P217 1185 aa18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 MORF4L1Q9UBU8 362 aa18.79■□□□□ 0.6
CSNK1D-223ENST00000584472 PSMA5P28066 241 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 LBX2Q6XYB7 198 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 CYB5R4Q7L1T6 521 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 KIF2CQ99661 725 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 TMEM106CQ9BVX2 250 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 TM6SF1Q9BZW5 370 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 TCP11L1Q9NUJ3 509 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 CLIP2Q9UDT6 1046 aa18.78■□□□□ 0.6
CSNK1D-223ENST00000584472 RLFQ13129 1914 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 CAPN2P17655 700 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 CTGFP29279 349 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 NOVP48745 357 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 PRPF38BQ5VTL8 546 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 SPICE1Q8N0Z3 855 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 ANKRD13CQ8N6S4 541 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 GMCL1P1Q8NEA9 526 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 TANGO6Q9C0B7 1094 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 IL17RBQ9NRM6 502 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 MGAMO43451 1857 aa18.77■□□□□ 0.6
CSNK1D-223ENST00000584472 PARP14Q460N5 1801 aa18.77■□□□□ 0.59
CSNK1D-223ENST00000584472 MYPNQ86TC9 1320 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 F5H6K3 240 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 FMNL1O95466 1100 aaPredicted RBP18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 HMGB1P09429 215 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 CASTP20810 708 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 MCM5P33992 734 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 KLRC3Q07444 240 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 COG2Q14746 738 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 A0A0G2JMZ2 1700 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 ZSWIM8A7E2V4 1837 aa18.76■□□□□ 0.59
CSNK1D-223ENST00000584472 NDUFB10O96000 172 aa18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 ANTXR2P58335 489 aa18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 EXOSC10Q01780 885 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 IRF5Q13568 498 aa18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 DHX32Q7L7V1 743 aaKnown RBP18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 CHST3Q7LGC8 479 aa18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 STX8Q9UNK0 236 aa18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 RABGAP1Q9Y3P9 1069 aa18.75■□□□□ 0.59
CSNK1D-223ENST00000584472 SPDYE16A6NNV3 312 aaPredicted RBP18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 PRC1O43663 620 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 NMT2O60551 498 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 CPA1P15085 419 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 RPS6KB1P23443 525 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 GRK4P32298 578 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 IQCA1Q86XH1 822 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 SLAIN1Q8ND83 568 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 GPRC5AQ8NFJ5 357 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 RAET1EQ8TD07 263 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 PXYLP1Q8TE99 480 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 ZKSCAN3Q9BRR0 538 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 CYP46A1Q9Y6A2 500 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 WDR19Q8NEZ3 1342 aa18.74■□□□□ 0.59
CSNK1D-223ENST00000584472 RAD21O60216 631 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 FLOT1O75955 427 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 ERVK-9P63128 1117 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 ERVK-24P63145 666 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 CCDC178Q5BJE1 867 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 MB21D1Q8N884 522 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 GMCL1Q96IK5 515 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 TTC14Q96N46 770 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 ZSCAN10Q96SZ4 725 aaPredicted RBP18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 MTA3Q9BTC8 594 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 TXNRD2Q9NNW7 524 aa18.73■□□□□ 0.59
CSNK1D-223ENST00000584472 DSG3P32926 999 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 FAM83BQ5T0W9 1011 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 POTEEQ6S8J3 1075 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 TMEM87BQ96K49 555 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 TCEANC2Q96MN5 208 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 UBAC1Q9BSL1 405 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 PAGR1Q9BTK6 254 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 TNKSO95271 1327 aa18.72■□□□□ 0.59
CSNK1D-223ENST00000584472 TNPO2O14787 897 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-223ENST00000584472 IFIT3O14879 490 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-223ENST00000584472 TOP1P11387 765 aaKnown RBP18.71■□□□□ 0.59
CSNK1D-223ENST00000584472 CCNA1P78396 465 aa18.71■□□□□ 0.59
CSNK1D-223ENST00000584472 PRKCZQ05513 592 aa18.71■□□□□ 0.59
CSNK1D-223ENST00000584472 SEC23AQ15436 765 aa18.71■□□□□ 0.59
CSNK1D-223ENST00000584472 SLFN13Q68D06 897 aa18.71■□□□□ 0.59
CSNK1D-223ENST00000584472 RCSD1Q6JBY9 416 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms