RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 GRB14Q14449 540 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 MAP3K21Q5TCX8 1036 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 VPS53Q5VIR6 699 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
SKA2-208ENST00000583927 GMCL1P1Q8NEA9 526 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 RILPL2Q969X0 211 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 SPATC1LQ9H0A9 340 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 BIN2Q9UBW5 565 aaPredicted RBP11.76□□□□□ -0.53
SKA2-208ENST00000583927 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
SKA2-208ENST00000583927 F5H6K3 240 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 PEX10O60683 326 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 PRDM1O75626 825 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 TSPY3P0CV98 308 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 TSPY8P0CW00 308 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 PTPREP23469 700 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 RGS2P41220 211 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 KLRC3Q07444 240 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 ZNF589Q86UQ0 364 aaPredicted RBP11.75□□□□□ -0.53
SKA2-208ENST00000583927 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 SPICE1Q8N0Z3 855 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 APBA2Q99767 749 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 RNF208Q9H0X6 261 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 MROH8Q9H579 483 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 PPP1R9AQ9ULJ8 1098 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 MYH6P13533 1939 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 RPTORQ8N122 1335 aa11.75□□□□□ -0.53
SKA2-208ENST00000583927 SGPL1O95470 568 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 SLC25A27O95847 323 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 NDUFB10O96000 172 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 IGHA2P01877 340 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 FDX1P10109 184 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 PDE4AP27815 886 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 COPB2P35606 906 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 TFAP4Q01664 338 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 ATP2B2Q01814 1243 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 PRPF38AQ8NAV1 312 aaKnown RBP11.74□□□□□ -0.53
SKA2-208ENST00000583927 REPS2Q8NFH8 660 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 TRIB2Q92519 343 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 ATG4CQ96DT6 458 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
SKA2-208ENST00000583927 CRISPLD2Q9H0B8 497 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 UNC93B1Q9H1C4 597 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 CLIP2Q9UDT6 1046 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 IVNS1ABPQ9Y6Y0 642 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 MCM3APO60318 1980 aa11.74□□□□□ -0.53
SKA2-208ENST00000583927 VWA5AO00534 786 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 ATP2A1O14983 1001 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 PLA2G6O60733 806 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 CYP2B6P20813 491 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 CTDSPL2Q05D32 466 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 TMEM132BQ14DG7 1078 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 FAM83BQ5T0W9 1011 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
SKA2-208ENST00000583927 ANKLE1Q8NAG6 615 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 U2AF1L4Q8WU68 220 aaKnown RBP11.73□□□□□ -0.53
SKA2-208ENST00000583927 DSCC1Q9BVC3 393 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 HMX1Q9NP08 348 aaPredicted RBP11.73□□□□□ -0.53
SKA2-208ENST00000583927 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
SKA2-208ENST00000583927 ZNF214Q9UL59 606 aaPredicted RBP11.73□□□□□ -0.53
SKA2-208ENST00000583927 RAD50Q92878 1312 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 ZKSCAN1P17029 563 aaPredicted RBP11.72□□□□□ -0.53
SKA2-208ENST00000583927 ERCC3P19447 782 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 IRX6P78412 446 aaPredicted RBP11.72□□□□□ -0.53
SKA2-208ENST00000583927 FAM47AQ5JRC9 791 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 PRPF38BQ5VTL8 546 aaKnown RBP11.72□□□□□ -0.53
SKA2-208ENST00000583927 RIOX2Q8IUF8 465 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 STAG1Q8WVM7 1258 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 GMCL1Q96IK5 515 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.72□□□□□ -0.53
SKA2-208ENST00000583927 CWC22Q9HCG8 908 aaKnown RBP11.72□□□□□ -0.53
SKA2-208ENST00000583927 IL17RBQ9NRM6 502 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 DIAPH3Q9NSV4 1193 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 FBXO28Q9NVF7 368 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 FEM1BQ9UK73 627 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 TACC3Q9Y6A5 838 aa11.72□□□□□ -0.53
SKA2-208ENST00000583927 RANBP2P49792 3224 aaKnown RBP11.72□□□□□ -0.53
SKA2-208ENST00000583927 MYCP01106 439 aaPredicted RBP11.71□□□□□ -0.53
SKA2-208ENST00000583927 GSPT1P15170 499 aaKnown RBP11.71□□□□□ -0.53
SKA2-208ENST00000583927 OAZ1P54368 228 aa11.71□□□□□ -0.53
SKA2-208ENST00000583927 AKNAD1Q5T1N1 836 aa11.71□□□□□ -0.53
SKA2-208ENST00000583927 OLFML2BQ68BL8 750 aa11.71□□□□□ -0.53
SKA2-208ENST00000583927 CWC27Q6UX04 472 aaKnown RBP11.71□□□□□ -0.53
SKA2-208ENST00000583927 TTC14Q96N46 770 aa11.71□□□□□ -0.53
SKA2-208ENST00000583927 RNF41Q9H4P4 317 aaPredicted RBP11.71□□□□□ -0.53
SKA2-208ENST00000583927 SLC38A10Q9HBR0 1119 aa11.71□□□□□ -0.53
SKA2-208ENST00000583927 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.53
SKA2-208ENST00000583927 RANBP6O60518 1105 aaKnown RBP11.7□□□□□ -0.54
SKA2-208ENST00000583927 BMP3P12645 472 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
SKA2-208ENST00000583927 ADORA2AP29274 412 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 STAT3P40763 770 aa11.7□□□□□ -0.54
SKA2-208ENST00000583927 CACNB2Q08289 660 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 645.2 ms