RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
CDK5RAP3-226ENST00000583182 C1orf53Q5VUE5 145 aa17.86■□□□□ 0.45
CDK5RAP3-226ENST00000583182 CYP2D7A0A087X1C5 515 aa17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 APBB1O00213 710 aa17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 WDR46O15213 610 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 ITGB8P26012 769 aa17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 TLE2Q04725 743 aa17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 CLASRPQ8N2M8 674 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 TTYH1Q9H313 450 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 FBXO28Q9NVF7 368 aa17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 ADAMTS5Q9UNA0 930 aa17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 PHF24Q9UPV7 400 aa17.85■□□□□ 0.45
CDK5RAP3-226ENST00000583182 MBD4O95243 580 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 SLC25A27O95847 323 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 CHGBP05060 677 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 PGK2P07205 417 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 ADD2P35612 726 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 CDK8P49336 464 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 SMAD3P84022 425 aaKnown RBP17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 SH2D4AQ9H788 454 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 XPNPEP3Q9NQH7 507 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 ATP8A2Q9NTI2 1148 aa17.84■□□□□ 0.45
CDK5RAP3-226ENST00000583182 MYH7P12883 1935 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 PGK1P00558 417 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 IFIT2P09913 472 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RARBP10826 455 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 EEF2P13639 858 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 TAL1P17542 331 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 C12orf60Q5U649 245 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RIOX2Q8IUF8 465 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 MAFAQ8NHW3 353 aaPredicted RBP17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 MYLIPQ8WY64 445 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 KIF1BPQ96EK5 621 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 CCDC17Q96LX7 622 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 MMP19Q99542 508 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 TINF2Q9BSI4 451 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 BCL11AQ9H165 835 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 PAG1Q9NWQ8 432 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 NRBP1Q9UHY1 535 aa17.83■□□□□ 0.44
CDK5RAP3-226ENST00000583182 USP17L12C9JPN9 530 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 USP17L21D6R901 530 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 EPHB4P54760 987 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 ZNF792Q3KQV3 632 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 C16orf86Q6ZW13 317 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 SIRT2Q8IXJ6 389 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 BOLA2Q9H3K6 86 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 TACC3Q9Y6A5 838 aa17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 SPTBN5Q9NRC6 3674 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-226ENST00000583182 ROBO3Q96MS0 1386 aa17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 VWA5AO00534 786 aa17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 CLTBP09497 229 aa17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 ZNF865P0CJ78 1059 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 REPS2Q8NFH8 660 aa17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 LENG1Q96BZ8 264 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 ZNF214Q9UL59 606 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 PPP1R9AQ9ULJ8 1098 aa17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 DIS3Q9Y2L1 958 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-226ENST00000583182 GREB1LQ9C091 1923 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 A0A1W2PQ45 241 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 A0A1W2PQY0 241 aa17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 KIAA0355O15063 1070 aa17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 STAT3P40763 770 aa17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 KCTD2Q14681 263 aa17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RNF180Q86T96 592 aa17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 KANSL2Q9H9L4 492 aa17.8■□□□□ 0.44
CDK5RAP3-226ENST00000583182 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 PQBP1O60828 265 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 ADAMTS4O75173 837 aa17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 ATP5JP18859 108 aa17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 FAM83BQ5T0W9 1011 aa17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RPAP2Q8IXW5 612 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RNPC3Q96LT9 517 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RAD21O60216 631 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 AKR1A1P14550 325 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RAG1P15918 1043 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 CTR9Q6PD62 1173 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 AMOTL1Q8IY63 956 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 HAUS7Q99871 368 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.78■□□□□ 0.443e-14■■□□□ 11.9
CDK5RAP3-226ENST00000583182 GOPCQ9HD26 462 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 SLC4A4Q9Y6R1 1079 aa17.78■□□□□ 0.44
CDK5RAP3-226ENST00000583182 RAB11FIP3O75154 756 aa17.77■□□□□ 0.44
CDK5RAP3-226ENST00000583182 FOSL2P15408 326 aa17.77■□□□□ 0.44
CDK5RAP3-226ENST00000583182 FAAP100Q0VG06 881 aa17.77■□□□□ 0.44
CDK5RAP3-226ENST00000583182 NUP88Q99567 741 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-226ENST00000583182 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-226ENST00000583182 TMEM39AQ9NV64 488 aa17.77■□□□□ 0.44
CDK5RAP3-226ENST00000583182 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 HMMRO75330 724 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 SNAI1O95863 264 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 COPB2P35606 906 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 ACLYP53396 1101 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 FPGSQ05932 587 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 ANKRD33Q7Z3H0 272 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 TSEN34Q9BSV6 310 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-226ENST00000583182 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms