RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 DPYDQ12882 1025 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 KCNJ12Q14500 433 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 SMC1AQ14683 1233 aaKnown RBP15.39■□□□□ 0.05
NDEL1-204ENST00000578172 CCDC122Q5T0U0 273 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 FAM84BQ96KN1 310 aaPredicted RBP15.39■□□□□ 0.05
NDEL1-204ENST00000578172 PARP3Q9Y6F1 533 aa15.39■□□□□ 0.05
NDEL1-204ENST00000578172 B4DLN1 442 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 SPATA1Q5VX52 437 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 SLC39A2Q9NP94 309 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 CWC15Q9P013 229 aaKnown RBP15.38■□□□□ 0.05
NDEL1-204ENST00000578172 ACTN4O43707 911 aaKnown RBP15.38■□□□□ 0.05
NDEL1-204ENST00000578172 SLURP2P0DP57 97 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 TNNI2P48788 182 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 PDE4DQ08499 809 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 STIM1Q13586 685 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 LRRC41Q15345 812 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 TDRD12Q587J7 1177 aaKnown RBP15.38■□□□□ 0.05
NDEL1-204ENST00000578172 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 FANCGO15287 622 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 SLFN14P0C7P3 912 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 KLK7P49862 253 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 LRRC47Q8N1G4 583 aaKnown RBP15.38■□□□□ 0.05
NDEL1-204ENST00000578172 GPATCH11Q8N954 259 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 ENOX1Q8TC92 643 aaKnown RBP15.38■□□□□ 0.05
NDEL1-204ENST00000578172 PDE11AQ9HCR9 933 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 ZNHIT6Q9NWK9 470 aaKnown RBP15.38■□□□□ 0.05
NDEL1-204ENST00000578172 C5P01031 1676 aa15.38■□□□□ 0.05
NDEL1-204ENST00000578172 CENPHQ9H3R5 247 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 LDHBP07195 334 aaKnown RBP15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CXCR5P32302 372 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 RBM5P52756 815 aaKnown RBP eCLIP15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CCDC96Q2M329 555 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 TRIM65Q6PJ69 517 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 ZSCAN29Q8IWY8 852 aaPredicted RBP15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CSGALNACT2Q8N6G5 542 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 RNF26Q9BY78 433 aaPredicted RBP15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CTAGE15A4D2H0 777 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CLSTN1O94985 981 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CTAGE8P0CG41 777 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 KIF5BP33176 963 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 TBC1D8BQ0IIM8 1120 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CTAGE6Q86UF2 777 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CTAGE4Q8IX94 777 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 AK7Q96M32 723 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 PLA2G12BQ9BX93 195 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 LUC7L2Q9Y383 392 aaKnown RBP15.37■□□□□ 0.05
NDEL1-204ENST00000578172 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 STX10O60499 249 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 INTS5Q6P9B9 1019 aaKnown RBP15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CCDC47Q96A33 483 aaKnown RBP15.37■□□□□ 0.05
NDEL1-204ENST00000578172 MED15Q96RN5 788 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 CRACR2AQ9BSW2 395 aa15.37■□□□□ 0.05
NDEL1-204ENST00000578172 RPN1P04843 607 aaKnown RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 KRT18P05783 430 aaKnown RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 FGFR2P21802 821 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 PRCPP42785 496 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 COPB1P53618 953 aaKnown RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 DCP1AQ9NPI6 582 aaPredicted RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 TCP11L1Q9NUJ3 509 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 CDHR2Q9BYE9 1310 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 TADA3O75528 432 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 NKX1-1Q15270 411 aaPredicted RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 BLIDQ8IZY5 108 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 MARCH10Q8NA82 808 aaPredicted RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 SH3RF3Q8TEJ3 882 aaPredicted RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 EXOC1Q9NV70 894 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 SPTY2D1Q68D10 685 aaPredicted RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 BPIFA3Q9BQP9 254 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 TMEM60Q9H2L4 133 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 NLRC4Q9NPP4 1024 aa15.36■□□□□ 0.05
NDEL1-204ENST00000578172 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
NDEL1-204ENST00000578172 CAMTA2O94983 1202 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 RFC4P35249 363 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 PKN1Q16512 942 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 PARP10Q53GL7 1025 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 SMCR8Q8TEV9 937 aaPredicted RBP15.35■□□□□ 0.05
NDEL1-204ENST00000578172 MORC2Q9Y6X9 1032 aaPredicted RBP15.35■□□□□ 0.05
NDEL1-204ENST00000578172 RNF225M0QZC1 329 aaPredicted RBP15.35■□□□□ 0.05
NDEL1-204ENST00000578172 COA7Q96BR5 231 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 SHISA4Q96DD7 197 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 LONRF2Q1L5Z9 754 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 TTC19Q6DKK2 380 aaPredicted RBP15.35■□□□□ 0.05
NDEL1-204ENST00000578172 TMTC3Q6ZXV5 915 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 NELFCDQ8IXH7 590 aa15.35■□□□□ 0.05
NDEL1-204ENST00000578172 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.35■□□□□ 0.05
NDEL1-204ENST00000578172 N4BP1O75113 896 aaKnown RBP15.34■□□□□ 0.05
NDEL1-204ENST00000578172 SF3A3Q12874 501 aaKnown RBP eCLIP15.34■□□□□ 0.05
NDEL1-204ENST00000578172 TYW1BQ6NUM6 668 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
NDEL1-204ENST00000578172 ADGRG1Q9Y653 693 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 PSMA7O14818 248 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 PLA2G4AP47712 749 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 KRT26Q7Z3Y9 468 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 CNGA4Q8IV77 575 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 SMARCAL1Q9NZC9 954 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 EFCAB8A8MWE9 144 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 AKR1B10O60218 316 aa15.34■□□□□ 0.05
NDEL1-204ENST00000578172 GRIK5Q16478 980 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms