RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 MAPK4P31152 587 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 IRF5Q13568 498 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 SIAH1Q8IUQ4 282 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 PLEKHM2Q8IWE5 1019 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 ZNF444Q8N0Y2 327 aaPredicted RBP10.81□□□□□ -0.68
NDE1-207ENST00000573203 LPAR1Q92633 364 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 TANGO6Q9C0B7 1094 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 VCPKMTQ9H867 229 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 CWC22Q9HCG8 908 aaKnown RBP10.81□□□□□ -0.68
NDE1-207ENST00000573203 HELLSQ9NRZ9 838 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 RABGAP1Q9Y3P9 1069 aa10.81□□□□□ -0.68
NDE1-207ENST00000573203 GREB1LQ9C091 1923 aaPredicted RBP10.81□□□□□ -0.68
NDE1-207ENST00000573203 MYH4Q9Y623 1939 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 PLXNB2O15031 1838 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 SPDYE16A6NNV3 312 aaPredicted RBP10.8□□□□□ -0.68
NDE1-207ENST00000573203 RAD21O60216 631 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 PRDM1O75626 825 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 ELNP15502 786 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 EN2P19622 333 aaPredicted RBP10.8□□□□□ -0.68
NDE1-207ENST00000573203 CCNA1P78396 465 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 PDE4BQ07343 736 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 COG2Q14746 738 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 MTFR1Q15390 333 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 Q3C1V9 767 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 MCMDC2Q4G0Z9 681 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 KIAA1755Q5JYT7 1200 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 SPICE1Q8N0Z3 855 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 PXYLP1Q8TE99 480 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 FAM227BQ96M60 508 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 OSBPL3Q9H4L5 887 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 GOPCQ9HD26 462 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 HOXC10Q9NYD6 342 aa10.8□□□□□ -0.68
NDE1-207ENST00000573203 A0A0D9SFI3 127 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 CNMDO75829 334 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 INHAP05111 366 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 CCL5P13501 91 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 PPARAQ07869 468 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 NMIQ13287 307 aaPredicted RBP10.79□□□□□ -0.68
NDE1-207ENST00000573203 WDR78Q5VTH9 848 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 POTEEQ6S8J3 1075 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 LBX2Q6XYB7 198 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 NUDT12Q9BQG2 462 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.79□□□□□ -0.68
NDE1-207ENST00000573203 RNF208Q9H0X6 261 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 PORCNQ9H237 461 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 GJD2Q9UKL4 321 aa10.79□□□□□ -0.68
NDE1-207ENST00000573203 RLFQ13129 1914 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 WDR46O15213 610 aaKnown RBP10.78□□□□□ -0.68
NDE1-207ENST00000573203 FLOT1O75955 427 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 TSPY3P0CV98 308 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 TSPY8P0CW00 308 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 CYP2B6P20813 491 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 CTDSPL2Q05D32 466 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 VPS53Q5VIR6 699 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 GPR142Q7Z601 462 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 PLEKHH3Q7Z736 793 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 SOCS4Q8WXH5 440 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 BTBD7Q9P203 1132 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 NYAP2Q9P242 653 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 PARP14Q460N5 1801 aa10.78□□□□□ -0.68
NDE1-207ENST00000573203 PDE4DIPQ5VU43 2346 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 FOXP2O15409 715 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 HMGCRP04035 888 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 SDSP20132 328 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 MFAP1P55081 439 aaKnown RBP10.77□□□□□ -0.69
NDE1-207ENST00000573203 ALX1Q15699 326 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 ZNF589Q86UQ0 364 aaPredicted RBP10.77□□□□□ -0.69
NDE1-207ENST00000573203 MB21D1Q8N884 522 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 ATG4CQ96DT6 458 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 UNC93B1Q9H1C4 597 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 DIAPH3Q9NSV4 1193 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 IVNS1ABPQ9Y6Y0 642 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 A0A0G2JMZ2 1700 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 CCDC171Q6TFL3 1326 aa10.77□□□□□ -0.69
NDE1-207ENST00000573203 COL11A1P12107 1806 aaPredicted RBP10.77□□□□□ -0.69
NDE1-207ENST00000573203 BRCA2P51587 3418 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 IGKV6D-41A0A0C4DH26 115 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 TSPY2A6NKD2 308 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 F5H6K3 240 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 HIP1O00291 1037 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 TTLL1O95922 423 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 GJB1P08034 283 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 HSPD1P10809 573 aaKnown RBP10.76□□□□□ -0.69
NDE1-207ENST00000573203 RGS2P41220 211 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 TFAP4Q01664 338 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 KLRC3Q07444 240 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 PLS1Q14651 629 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 MORN1Q5T089 497 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 FAM83BQ5T0W9 1011 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 TRMT44Q8IYL2 757 aaKnown RBP10.76□□□□□ -0.69
NDE1-207ENST00000573203 NEDD1Q8NHV4 660 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 CEP95Q96GE4 821 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 SPATC1LQ9H0A9 340 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 MTMR4Q9NYA4 1195 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 ANAPC4Q9UJX5 808 aa10.76□□□□□ -0.69
NDE1-207ENST00000573203 PLIN4Q96Q06 1357 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms