RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CACTIN-AS1Q8N1I8 211 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 NGEFQ8N5V2 710 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 NGDNQ8NEJ9 315 aaKnown RBP9.08□□□□□ -0.96
CNOT1-222ENST00000570139 STAG1Q8WVM7 1258 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 COG3Q96JB2 828 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 EPN3Q9H201 632 aa9.08□□□□□ -0.96
CNOT1-222ENST00000570139 TTC21BQ7Z4L5 1316 aa9.07□□□□□ -0.96
CNOT1-222ENST00000570139 MST1RQ04912 1400 aa9.07□□□□□ -0.96
CNOT1-222ENST00000570139 IQCA1LA6NCM1 817 aa9.07□□□□□ -0.96
CNOT1-222ENST00000570139 DALRD3Q5D0E6 543 aaKnown RBP9.07□□□□□ -0.96
CNOT1-222ENST00000570139 HGSNATQ68CP4 663 aa9.07□□□□□ -0.96
CNOT1-222ENST00000570139 ADAMTSL4Q6UY14 1074 aa9.07□□□□□ -0.96
CNOT1-222ENST00000570139 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
CNOT1-222ENST00000570139 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
CNOT1-222ENST00000570139 GMIPQ9P107 970 aa9.07□□□□□ -0.96
CNOT1-222ENST00000570139 KIF24Q5T7B8 1368 aa9.07□□□□□ -0.96
CNOT1-222ENST00000570139 TRPM3Q9HCF6 1732 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-222ENST00000570139 CCDC163A0A0D9SF12 145 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 SIN3BO75182 1162 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 HTR3BO95264 441 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 CPB1P15086 417 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 CNGA1P29973 690 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 CCDC184Q52MB2 194 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-222ENST00000570139 FOXR1Q6PIV2 292 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 SYT9Q86SS6 491 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 PDZD3Q86UT5 571 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 FERMT3Q86UX7 667 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 MFSD3Q96ES6 412 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 ACSBG1Q96GR2 724 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 SUGT1Q9Y2Z0 365 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 CD2APQ9Y5K6 639 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 PNPLA6Q8IY17 1366 aa9.06□□□□□ -0.96
CNOT1-222ENST00000570139 PHRF1Q9P1Y6 1649 aaKnown RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 MAP2P11137 1827 aaKnown RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 PTPN11Q06124 597 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 ZNF468Q5VIY5 522 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 INTS3Q68E01 1043 aaKnown RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 MRM1Q6IN84 353 aaKnown RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 ELMSAN1Q6PJG2 1045 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 VHLLQ6RSH7 139 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 CCDC155Q8N6L0 562 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 ZNF837Q96EG3 531 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 CCDC136Q96JN2 1154 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 SPATA9Q9BWV2 254 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 LACRTQ9GZZ8 138 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 SOX17Q9H6I2 414 aaPredicted RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 HOMER2Q9NSB8 354 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 G3BP2Q9UN86 482 aaKnown RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 SNCAIPQ9Y6H5 919 aa9.05□□□□□ -0.96
CNOT1-222ENST00000570139 MARF1Q9Y4F3 1742 aaKnown RBP9.05□□□□□ -0.96
CNOT1-222ENST00000570139 AXIN1O15169 862 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 PDE4BQ07343 736 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 WIPI1Q5MNZ9 446 aaPredicted RBP9.04□□□□□ -0.96
CNOT1-222ENST00000570139 ODR4Q5SWX8 454 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 HDXQ7Z353 690 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 CHAC2Q8WUX2 184 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 JDP2Q8WYK2 163 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 NINJ1Q92982 152 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 TNFRSF25Q93038 417 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 GTPBP3Q969Y2 492 aaKnown RBP9.04□□□□□ -0.96
CNOT1-222ENST00000570139 PNNQ9H307 717 aaKnown RBP9.04□□□□□ -0.96
CNOT1-222ENST00000570139 ANTXR1Q9H6X2 564 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 AVENQ9NQS1 362 aaPredicted RBP9.04□□□□□ -0.96
CNOT1-222ENST00000570139 CACNA2D2Q9NY47 1150 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 FRRS1LQ9P0K9 344 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 PCDHA4Q9UN74 947 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 SLC6A14Q9UN76 642 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 NUDCQ9Y266 331 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 FAN1Q9Y2M0 1017 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 ALS2Q96Q42 1657 aa9.04□□□□□ -0.96
CNOT1-222ENST00000570139 RTL1A6NKG5 1358 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 UPK3BL1B0FP48 263 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 UPK3BL2E5RIL1 263 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 H3BRJ5 948 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 CYP11A1P05108 521 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 CDC27P30260 824 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 MTHFSP49914 203 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.03□□□□□ -0.96
CNOT1-222ENST00000570139 NIM1KQ8IY84 436 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
CNOT1-222ENST00000570139 KRT82Q9NSB4 513 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 SLIT3O75094 1523 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 ABCC6O95255 1503 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 MED1Q15648 1581 aaPredicted RBP9.03□□□□□ -0.96
CNOT1-222ENST00000570139 NPHP3Q7Z494 1330 aa9.03□□□□□ -0.96
CNOT1-222ENST00000570139 SBNO1A3KN83 1393 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 AGRPO00253 132 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 TM4SF20Q53R12 229 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 PERM1Q5SV97 790 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 OVOS1Q6IE37 1185 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 NME9Q86XW9 330 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 ZBTB38Q8NAP3 1195 aaPredicted RBP9.02□□□□□ -0.97
CNOT1-222ENST00000570139 REV1Q9UBZ9 1251 aa9.02□□□□□ -0.97
CNOT1-222ENST00000570139 TRIM33Q9UPN9 1127 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms