RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KIF2CQ99661 725 aa24.88■■□□□ 1.57
CASC4-204ENST00000557945 NAP1L2Q9ULW6 460 aaPredicted RBP24.88■■□□□ 1.57
CASC4-204ENST00000557945 PDHBP11177 359 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 OSBPP22059 807 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 IRX3P78415 501 aaPredicted RBP24.87■■□□□ 1.57
CASC4-204ENST00000557945 SAMD1Q6SPF0 538 aaPredicted RBP24.87■■□□□ 1.57
CASC4-204ENST00000557945 SYNE3Q6ZMZ3 975 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 ZNF654Q8IZM8 581 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 NUP133Q8WUM0 1156 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 PNMA3Q9UL41 463 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 SLC45A1Q9Y2W3 748 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 SLC12A7Q9Y666 1083 aa24.87■■□□□ 1.57
CASC4-204ENST00000557945 FRMPD2Q68DX3 1309 aaPredicted RBP24.87■■□□□ 1.57
CASC4-204ENST00000557945 THSD7BQ9C0I4 1608 aa24.86■■□□□ 1.57
CASC4-204ENST00000557945 HOXA7P31268 230 aaPredicted RBP24.86■■□□□ 1.57
CASC4-204ENST00000557945 CATSPERGQ6ZRH7 1159 aa24.86■■□□□ 1.57
CASC4-204ENST00000557945 KCTD1Q719H9 257 aa24.86■■□□□ 1.57
CASC4-204ENST00000557945 SGMS1Q86VZ5 419 aa24.86■■□□□ 1.57
CASC4-204ENST00000557945 MYL10Q9BUA6 226 aa24.86■■□□□ 1.57
CASC4-204ENST00000557945 ZCCHC17Q9NP64 241 aaKnown RBP24.86■■□□□ 1.57
CASC4-204ENST00000557945 KLF18A0A0U1RQI7 1052 aa24.85■■□□□ 1.57
CASC4-204ENST00000557945 FLOT1O75955 427 aa24.85■■□□□ 1.57
CASC4-204ENST00000557945 ALDH1A1P00352 501 aa24.85■■□□□ 1.57
CASC4-204ENST00000557945 MAP2K1Q02750 393 aaPredicted RBP24.85■■□□□ 1.57
CASC4-204ENST00000557945 APOBRQ0VD83 1088 aa24.85■■□□□ 1.57
CASC4-204ENST00000557945 IKQ13123 557 aaPredicted RBP24.85■■□□□ 1.57
CASC4-204ENST00000557945 TAF1CQ15572 869 aaPredicted RBP24.85■■□□□ 1.57
CASC4-204ENST00000557945 ASCC2Q9H1I8 757 aaPredicted RBP24.85■■□□□ 1.57
CASC4-204ENST00000557945 GPCPD1Q9NPB8 672 aa24.85■■□□□ 1.57
CASC4-204ENST00000557945 DDAH1O94760 285 aa24.84■■□□□ 1.57
CASC4-204ENST00000557945 CYP2C8P10632 490 aa24.84■■□□□ 1.57
CASC4-204ENST00000557945 TOB2Q14106 344 aaPredicted RBP24.84■■□□□ 1.57
CASC4-204ENST00000557945 RABEP1Q15276 862 aa24.84■■□□□ 1.57
CASC4-204ENST00000557945 RAB11FIP4Q86YS3 637 aa24.84■■□□□ 1.57
CASC4-204ENST00000557945 FBXL16Q8N461 479 aa24.84■■□□□ 1.57
CASC4-204ENST00000557945 PARK7Q99497 189 aaKnown RBP24.84■■□□□ 1.57
CASC4-204ENST00000557945 BRPF3Q9ULD4 1205 aa24.84■■□□□ 1.57
CASC4-204ENST00000557945 TMEM232C9JQI7 657 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 PARP1P09874 1014 aaKnown RBP24.83■■□□□ 1.57
CASC4-204ENST00000557945 GOLGA8HP0CJ92 632 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 SNHG28P0DPA3 235 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 ZNF543Q08ER8 600 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 TROAPQ12815 778 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 LARP6Q9BRS8 491 aaKnown RBP24.83■■□□□ 1.57
CASC4-204ENST00000557945 BEGAINQ9BUH8 593 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 AGXT2Q9BYV1 514 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 FBXO28Q9NVF7 368 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 FEM1BQ9UK73 627 aa24.83■■□□□ 1.57
CASC4-204ENST00000557945 TRPA1O75762 1119 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 CALM1P0DP23 149 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 CALM2P0DP24 149 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 CALM3P0DP25 149 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 RXRAP19793 462 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 COG2Q14746 738 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 APOA5Q6Q788 366 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 MICU3Q86XE3 530 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 CCDC144CPQ8IYA2 1237 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 SMCR8Q8TEV9 937 aaPredicted RBP24.82■■□□□ 1.56
CASC4-204ENST00000557945 P2RX7Q99572 595 aaKnown RBP24.82■■□□□ 1.56
CASC4-204ENST00000557945 ZFYVE28Q9HCC9 887 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 RNF186Q9NXI6 227 aa24.82■■□□□ 1.56
CASC4-204ENST00000557945 ZBTB43O43298 467 aa24.81■■□□□ 1.56
CASC4-204ENST00000557945 AK2P54819 239 aa24.81■■□□□ 1.56
CASC4-204ENST00000557945 ANKRD1Q15327 319 aa24.81■■□□□ 1.56
CASC4-204ENST00000557945 ASPRV1Q53RT3 343 aa24.81■■□□□ 1.56
CASC4-204ENST00000557945 GPATCH4Q5T3I0 446 aaKnown RBP24.81■■□□□ 1.56
CASC4-204ENST00000557945 TTBK2Q6IQ55 1244 aa24.81■■□□□ 1.56
CASC4-204ENST00000557945 NOL8Q76FK4 1167 aaKnown RBP24.81■■□□□ 1.56
CASC4-204ENST00000557945 CTCFLQ8NI51 663 aaPredicted RBP24.81■■□□□ 1.56
CASC4-204ENST00000557945 SLF1Q9BQI6 1058 aa24.81■■□□□ 1.56
CASC4-204ENST00000557945 ALDH8A1Q9H2A2 487 aaPredicted RBP24.81■■□□□ 1.56
CASC4-204ENST00000557945 GOLGA8BA8MQT2 603 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 CA12O43570 354 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 STAT2P52630 851 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 CRHR2Q13324 411 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 GRM4Q14833 912 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 FAM160B2Q86V87 743 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 CHURC1Q8WUH1 139 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 KIFC2Q96AC6 838 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 HOXC10Q9NYD6 342 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 SLC16A2P36021 539 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 HERVK_113P62684 666 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 PPP1R9AQ9ULJ8 1098 aa24.8■■□□□ 1.56
CASC4-204ENST00000557945 TBC1D8O95759 1140 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 DSG3P32926 999 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 KIF5BP33176 963 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 STAG2Q8N3U4 1231 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 PRPF38AQ8NAV1 312 aaKnown RBP24.79■■□□□ 1.56
CASC4-204ENST00000557945 FANCBQ8NB91 859 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 ATG4CQ96DT6 458 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 MAP3K14Q99558 947 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 UBA5Q9GZZ9 404 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 MAD2L2Q9UI95 211 aa24.79■■□□□ 1.56
CASC4-204ENST00000557945 PALM3A6NDB9 673 aaPredicted RBP24.78■■□□□ 1.56
CASC4-204ENST00000557945 SPDYE16A6NNV3 312 aaPredicted RBP24.78■■□□□ 1.56
CASC4-204ENST00000557945 GOLGA8AA7E2F4 631 aa24.78■■□□□ 1.56
CASC4-204ENST00000557945 JMYQ8N9B5 988 aa24.78■■□□□ 1.56
CASC4-204ENST00000557945 WBP1LQ9NX94 342 aa24.78■■□□□ 1.56
CASC4-204ENST00000557945 MYPNQ86TC9 1320 aa24.77■■□□□ 1.56
CASC4-204ENST00000557945 KLRF2D3W0D1 207 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 827.5 ms