RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 PIM2Q9P1W9 311 aa7.78□□□□□ -1.16
FOXN3-206ENST00000554005 APEX2Q9UBZ4 518 aa7.78□□□□□ -1.16
FOXN3-206ENST00000554005 FBXL21Q9UKT6 434 aa7.78□□□□□ -1.16
FOXN3-206ENST00000554005 LEMD3Q9Y2U8 911 aa7.78□□□□□ -1.16
FOXN3-206ENST00000554005 NAT2P11245 290 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 TCEAL1Q15170 157 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 NKPD1Q17RQ9 610 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 ARHGAP27Q6ZUM4 889 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 SPATC1Q76KD6 591 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 SPACA3Q8IXA5 215 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 ZNF513Q8N8E2 541 aaPredicted RBP7.77□□□□□ -1.17
FOXN3-206ENST00000554005 DNAJC7Q99615 494 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 GBP3Q9H0R5 595 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 WHRNQ9P202 907 aa7.77□□□□□ -1.17
FOXN3-206ENST00000554005 SHISA3A0PJX4 238 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 FAM155AB1AL88 458 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-206ENST00000554005 CYP26A1O43174 497 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 CEACAM5P06731 702 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 ITGA4P13612 1032 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 ZNF445P59923 1031 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 NMIQ13287 307 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-206ENST00000554005 PRSS36Q5K4E3 855 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 JAZF1Q86VZ6 243 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 ZNF669Q96BR6 464 aaPredicted RBP7.76□□□□□ -1.17
FOXN3-206ENST00000554005 APBA2Q99767 749 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 GFOD1Q9NXC2 390 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 PFDN2Q9UHV9 154 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 ZMYM5Q9UJ78 669 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 PLAGL2Q9UPG8 496 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 ST14Q9Y5Y6 855 aa7.76□□□□□ -1.17
FOXN3-206ENST00000554005 SIGLEC6O43699 453 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 DIAPH1O60610 1272 aaKnown RBP7.75□□□□□ -1.17
FOXN3-206ENST00000554005 FOSL1P15407 271 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 SV2CQ496J9 727 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 ADAT2Q7Z6V5 191 aaKnown RBP7.75□□□□□ -1.17
FOXN3-206ENST00000554005 PLD6Q8N2A8 252 aaKnown RBP7.75□□□□□ -1.17
FOXN3-206ENST00000554005 GPR62Q9BZJ7 368 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 SEMA6BQ9H3T3 888 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 PRR13Q9NZ81 148 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 TBX22Q9Y458 520 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 FHOD1Q9Y613 1164 aa7.75□□□□□ -1.17
FOXN3-206ENST00000554005 PPM1BO75688 479 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 PRAMEF1O95521 474 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 TGFB1P01137 390 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 SRFP11831 508 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 NOL9Q5SY16 702 aaKnown RBP7.74□□□□□ -1.17
FOXN3-206ENST00000554005 CDKAL1Q5VV42 579 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 LILRB2Q8N423 598 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 ADCY4Q8NFM4 1077 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 BRF1Q92994 677 aa7.74□□□□□ -1.17
FOXN3-206ENST00000554005 DUSP15Q9H1R2 295 aaPredicted RBP7.74□□□□□ -1.17
FOXN3-206ENST00000554005 ZC3H7BQ9UGR2 993 aaKnown RBP7.74□□□□□ -1.17
FOXN3-206ENST00000554005 A0A087WZG4 1122 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-206ENST00000554005 CLCN7P51798 805 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 SSRP1Q08945 709 aaKnown RBP7.73□□□□□ -1.17
FOXN3-206ENST00000554005 IFI16Q16666 785 aaKnown RBP7.73□□□□□ -1.17
FOXN3-206ENST00000554005 ZNF227Q86WZ6 799 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 FIBCD1Q8N539 461 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 NETO1Q8TDF5 533 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 SYTL5Q8TDW5 730 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-206ENST00000554005 LGR4Q9BXB1 951 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 HDAC8Q9BY41 377 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 ASCC2Q9H1I8 757 aaPredicted RBP7.73□□□□□ -1.17
FOXN3-206ENST00000554005 CHST7Q9NS84 486 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 MINPP1Q9UNW1 487 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 TMA7Q9Y2S6 64 aaKnown RBP7.73□□□□□ -1.17
FOXN3-206ENST00000554005 SUGT1Q9Y2Z0 365 aa7.73□□□□□ -1.17
FOXN3-206ENST00000554005 MRPL42Q9Y6G3 142 aaKnown RBP7.73□□□□□ -1.17
FOXN3-206ENST00000554005 TLDC2A0PJX2 215 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 IQCA1LA6NCM1 817 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 AGRPO00253 132 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 SMARCA5O60264 1052 aaPredicted RBP7.72□□□□□ -1.17
FOXN3-206ENST00000554005 ITGAVP06756 1048 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 ARHGEF39Q8N4T4 335 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 BVESQ8NE79 360 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 PPP1R14AQ96A00 147 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 SGSM3Q96HU1 749 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 RCC1LQ96I51 464 aaKnown RBP7.72□□□□□ -1.17
FOXN3-206ENST00000554005 RNPC3Q96LT9 517 aaKnown RBP7.72□□□□□ -1.17
FOXN3-206ENST00000554005 HSPA12BQ96MM6 686 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 SPATA9Q9BWV2 254 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 NOL6Q9H6R4 1146 aaKnown RBP7.72□□□□□ -1.17
FOXN3-206ENST00000554005 CGGBP1Q9UFW8 167 aaPredicted RBP7.72□□□□□ -1.17
FOXN3-206ENST00000554005 KDM2BQ8NHM5 1336 aa7.72□□□□□ -1.17
FOXN3-206ENST00000554005 A0A1W2PQU0 124 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 H3BS24 57 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 ITGB7P26010 798 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 CLEC16AQ2KHT3 1053 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 LRRC47Q8N1G4 583 aaKnown RBP7.71□□□□□ -1.18
FOXN3-206ENST00000554005 NLGN1Q8N2Q7 840 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 JMYQ8N9B5 988 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 LRRN4CLQ8ND94 238 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 ENOX1Q8TC92 643 aaKnown RBP7.71□□□□□ -1.18
FOXN3-206ENST00000554005 DSCC1Q9BVC3 393 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 TRIT1Q9H3H1 467 aaKnown RBP7.71□□□□□ -1.18
FOXN3-206ENST00000554005 KANSL2Q9H9L4 492 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 SEMA3GQ9NS98 782 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 GPATCH2Q9NW75 528 aa7.71□□□□□ -1.18
FOXN3-206ENST00000554005 LRP2BPQ9P2M1 347 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms