RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TROAPQ12815 778 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 SART3Q15020 963 aaKnown RBP15.29■□□□□ 0.04
RAB5C-206ENST00000550406 SGMS1Q86VZ5 419 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
RAB5C-206ENST00000550406 ASCC2Q9H1I8 757 aaPredicted RBP15.29■□□□□ 0.04
RAB5C-206ENST00000550406 ZCCHC17Q9NP64 241 aaKnown RBP15.29■□□□□ 0.04
RAB5C-206ENST00000550406 FBXO28Q9NVF7 368 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 A0A0G2JMZ2 1700 aa15.29■□□□□ 0.04
RAB5C-206ENST00000550406 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 CYP2C8P10632 490 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 BMP3P12645 472 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 TTBK2Q6IQ55 1244 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 KCTD1Q719H9 257 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 DCAF4Q8WV16 495 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 MYL10Q9BUA6 226 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
RAB5C-206ENST00000550406 PDRG1Q9NUG6 133 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 WBP1LQ9NX94 342 aa15.28■□□□□ 0.04
RAB5C-206ENST00000550406 BAZ2BQ9UIF8 2168 aaKnown RBP15.27■□□□□ 0.04
RAB5C-206ENST00000550406 PEX10O60683 326 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 TRPA1O75762 1119 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 SLC1A4P43007 532 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 ZNF543Q08ER8 600 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 APOBRQ0VD83 1088 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 RAB11FIP4Q86YS3 637 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 STAG2Q8N3U4 1231 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 BRF1Q92994 677 aa15.27■□□□□ 0.04
RAB5C-206ENST00000550406 LARP6Q9BRS8 491 aaKnown RBP15.27■□□□□ 0.04
RAB5C-206ENST00000550406 UPF2Q9HAU5 1272 aaKnown RBP15.27■□□□□ 0.04
RAB5C-206ENST00000550406 FRMPD2Q68DX3 1309 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-206ENST00000550406 MYH6P13533 1939 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 PALM3A6NDB9 673 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-206ENST00000550406 TMEM232C9JQI7 657 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 CA12O43570 354 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 GOLGA8HP0CJ92 632 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 NEK4P51957 841 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 EVCP57679 992 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 CRHR2Q13324 411 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 GRM4Q14833 912 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 TAF1CQ15572 869 aaPredicted RBP15.26■□□□□ 0.03
RAB5C-206ENST00000550406 OTUD7BQ6GQQ9 843 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 CFHR5Q9BXR6 569 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 TANGO6Q9C0B7 1094 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 CPVLQ9H3G5 476 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 MAD2L2Q9UI95 211 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 ADAMTS5Q9UNA0 930 aa15.26■□□□□ 0.03
RAB5C-206ENST00000550406 MGAMO43451 1857 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 ZSWIM8A7E2V4 1837 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 KLF18A0A0U1RQI7 1052 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 CCDC69A6NI79 296 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 SPDYE16A6NNV3 312 aaPredicted RBP15.25■□□□□ 0.03
RAB5C-206ENST00000550406 PLA2G6O60733 806 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 CNMDO75829 334 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 TBC1D8O95759 1140 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 RXRAP19793 462 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 OSBPP22059 807 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 DSG3P32926 999 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 MAP2K1Q02750 393 aaPredicted RBP15.25■□□□□ 0.03
RAB5C-206ENST00000550406 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.03
RAB5C-206ENST00000550406 COG2Q14746 738 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 CCDC96Q2M329 555 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 SLC35G1Q2M3R5 365 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 BTNL9Q6UXG8 535 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 CATIPQ7Z7H3 387 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 FAM217BQ9NTX9 383 aaPredicted RBP15.25■□□□□ 0.03
RAB5C-206ENST00000550406 HPS5Q9UPZ3 1129 aa15.25■□□□□ 0.03
RAB5C-206ENST00000550406 FLOT1O75955 427 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 DDAH1O94760 285 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 PARP1P09874 1014 aaKnown RBP15.24■□□□□ 0.03
RAB5C-206ENST00000550406 SLC16A2P36021 539 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 AK2P54819 239 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 HERVK_113P62684 666 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 IRX3P78415 501 aaPredicted RBP15.24■□□□□ 0.03
RAB5C-206ENST00000550406 FGD1P98174 961 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 C17orf99Q6UX52 265 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 LBX2Q6XYB7 198 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 NBPF11Q86T75 865 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 REPS2Q8NFH8 660 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 NUP133Q8WUM0 1156 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 ATG4CQ96DT6 458 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 MAP3K14Q99558 947 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 TXNRD2Q9NNW7 524 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 RBPJLQ9UBG7 517 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 FEM1BQ9UK73 627 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 PPP1R9AQ9ULJ8 1098 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 SLC12A7Q9Y666 1083 aa15.24■□□□□ 0.03
RAB5C-206ENST00000550406 MYPNQ86TC9 1320 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 DOCK3Q8IZD9 2030 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 TLR2O60603 784 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 BCRP11274 1271 aa15.23■□□□□ 0.03
RAB5C-206ENST00000550406 Q3C1V9 767 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms