RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 CCNA1P78396 465 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 PPP4R3BQ5MIZ7 849 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 GPR142Q7Z601 462 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 GMCL1P1Q8NEA9 526 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 IL17RBQ9NRM6 502 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 HOXC10Q9NYD6 342 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 CTNNA3Q9UI47 895 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 SYNPO2Q9UMS6 1093 aa13.98□□□□□ -0.17
RAB5C-204ENST00000547517 SGSM2O43147 1006 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 ADCY3O60266 1144 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 ELNP15502 786 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 MLLT1Q03111 559 aaPredicted RBP13.97□□□□□ -0.17
RAB5C-204ENST00000547517 IRF5Q13568 498 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 PLS1Q14651 629 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 BMP2KLQ5H9B9 411 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 MB21D1Q8N884 522 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 SLAIN1Q8ND83 568 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 SOCS4Q8WXH5 440 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 MKL1Q969V6 931 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 BIN2Q9UBW5 565 aaPredicted RBP13.97□□□□□ -0.17
RAB5C-204ENST00000547517 PPP1R9AQ9ULJ8 1098 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 MTMR7Q9Y216 660 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 PLXNB2O15031 1838 aa13.97□□□□□ -0.17
RAB5C-204ENST00000547517 BRCA2P51587 3418 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 PTH1RQ03431 593 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 PLEKHH3Q7Z736 793 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 NKX2-3Q8TAU0 364 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 ESR2Q92731 530 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 SLF1Q9BQI6 1058 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 MOV10L1Q9BXT6 1211 aaKnown RBP13.96□□□□□ -0.17
RAB5C-204ENST00000547517 SPATC1LQ9H0A9 340 aa13.96□□□□□ -0.17
RAB5C-204ENST00000547517 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 COL11A1P12107 1806 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-204ENST00000547517 POTEFA5A3E0 1075 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 B4E1Z4 1266 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 INHAP05111 366 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 CYP2B6P20813 491 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 TMEM132BQ14DG7 1078 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 ZKSCAN3Q9BRR0 538 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 GJD2Q9UKL4 321 aa13.95□□□□□ -0.18
RAB5C-204ENST00000547517 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-204ENST00000547517 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
RAB5C-204ENST00000547517 VWA5AO00534 786 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 KDM4AO75164 1064 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 BMP3P12645 472 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 ERCC3P19447 782 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 MCCP23508 829 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 SLC1A4P43007 532 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 NOVP48745 357 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 UBXN2AP68543 259 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 IKQ13123 557 aaPredicted RBP13.94□□□□□ -0.18
RAB5C-204ENST00000547517 MTFR1Q15390 333 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 NCAPG2Q86XI2 1143 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 PXYLP1Q8TE99 480 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 KIFC2Q96AC6 838 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 GMCL1Q96IK5 515 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 ESYT1Q9BSJ8 1104 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 TMEM106CQ9BVX2 250 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 IVNS1ABPQ9Y6Y0 642 aa13.94□□□□□ -0.18
RAB5C-204ENST00000547517 TOP1P11387 765 aaKnown RBP13.93□□□□□ -0.18
RAB5C-204ENST00000547517 RGS2P41220 211 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 STAT2P52630 851 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 MORN1Q5T089 497 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 KCTD1Q719H9 257 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 SHCBP1Q8NEM2 672 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 TRIB2Q92519 343 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 APBA2Q99767 749 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 KRT23Q9C075 422 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 CNNM2Q9H8M5 875 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 ADAMTS5Q9UNA0 930 aa13.93□□□□□ -0.18
RAB5C-204ENST00000547517 CTDP1Q9Y5B0 961 aaPredicted RBP13.93□□□□□ -0.18
RAB5C-204ENST00000547517 ZNF236Q9UL36 1845 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 SLC15A5A6NIM6 579 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 HMGCRP04035 888 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 CYP21A2P08686 494 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 CCL5P13501 91 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-204ENST00000547517 PTPREP23469 700 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 NT5C2P49902 561 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 MAP2K5Q13163 448 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 GRB14Q14449 540 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 RCSD1Q6JBY9 416 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 IQCA1Q86XH1 822 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 PRPF38AQ8NAV1 312 aaKnown RBP13.92□□□□□ -0.18
RAB5C-204ENST00000547517 REPS2Q8NFH8 660 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 DCAF4Q8WV16 495 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 USP6NLQ92738 828 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 UNC93B1Q9H1C4 597 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
RAB5C-204ENST00000547517 ZNF214Q9UL59 606 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms