RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 TGFB2P61812 414 aa9.72□□□□□ -0.85
RAP1B-230ENST00000543697 SRSF11Q05519 484 aaKnown RBP9.72□□□□□ -0.85
RAP1B-230ENST00000543697 GAS6Q14393 721 aa9.72□□□□□ -0.85
RAP1B-230ENST00000543697 NFE2L2Q16236 605 aa9.72□□□□□ -0.85
RAP1B-230ENST00000543697 MCM10Q7L590 875 aa9.72□□□□□ -0.85
RAP1B-230ENST00000543697 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
RAP1B-230ENST00000543697 PLEKHF1Q96S99 279 aa9.72□□□□□ -0.85
RAP1B-230ENST00000543697 SRA1Q9HD15 236 aaKnown RBP9.72□□□□□ -0.85
RAP1B-230ENST00000543697 INPP5FQ9Y2H2 1132 aa9.72□□□□□ -0.85
RAP1B-230ENST00000543697 RRP7AQ9Y3A4 280 aaKnown RBP9.72□□□□□ -0.85
RAP1B-230ENST00000543697 C5P01031 1676 aa9.71□□□□□ -0.85
RAP1B-230ENST00000543697 KCNA3P22001 575 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 GRIA4P48058 902 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 GJA8P48165 433 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.86
RAP1B-230ENST00000543697 DCTN1Q14203 1278 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 CEP135Q66GS9 1140 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.86
RAP1B-230ENST00000543697 ASAP3Q8TDY4 903 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 TMEM74Q96NL1 305 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 IGFLR1Q9H665 355 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 SLC52A2Q9HAB3 445 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 CAPN10Q9HC96 672 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 TMEM39AQ9NV64 488 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 CCNL1Q9UK58 526 aaPredicted RBP9.71□□□□□ -0.86
RAP1B-230ENST00000543697 WDR33Q9C0J8 1336 aaKnown RBP9.71□□□□□ -0.86
RAP1B-230ENST00000543697 PALLDQ8WX93 1383 aa9.71□□□□□ -0.86
RAP1B-230ENST00000543697 TAF1LQ8IZX4 1826 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 J3QW42 95 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 DPEP1P16444 411 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 TMPOP42166 694 aaKnown RBP9.7□□□□□ -0.86
RAP1B-230ENST00000543697 TBC1D8BQ0IIM8 1120 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 LMOD3Q0VAK6 560 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 TTC5Q8N0Z6 440 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 IL17REQ8NFR9 667 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 PNISRQ8TF01 805 aaKnown RBP9.7□□□□□ -0.86
RAP1B-230ENST00000543697 IRF7Q92985 503 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 WNT8BQ93098 351 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 SOX17Q9H6I2 414 aaPredicted RBP9.7□□□□□ -0.86
RAP1B-230ENST00000543697 KCNQ5Q9NR82 932 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 ASAP1Q9ULH1 1129 aa9.7□□□□□ -0.86
RAP1B-230ENST00000543697 RANBP2P49792 3224 aaKnown RBP9.7□□□□□ -0.86
RAP1B-230ENST00000543697 BTBD11A6QL63 1104 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 APAF1O14727 1248 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 HTATSF1O43719 755 aaKnown RBP9.69□□□□□ -0.86
RAP1B-230ENST00000543697 B3GALT4O96024 378 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 VCANP13611 3396 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 CPB1P15086 417 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 UBR3Q6ZT12 1888 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 FLAD1Q8NFF5 587 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 RASGRP4Q8TDF6 673 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 NECAB3Q96P71 396 aaPredicted RBP9.69□□□□□ -0.86
RAP1B-230ENST00000543697 POP1Q99575 1024 aaKnown RBP9.69□□□□□ -0.86
RAP1B-230ENST00000543697 SOX13Q9UN79 622 aa9.69□□□□□ -0.86
RAP1B-230ENST00000543697 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.69□□□□□ -0.86
RAP1B-230ENST00000543697 CCER2I3L3R5 266 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 RGS9O75916 674 aaPredicted RBP9.68□□□□□ -0.86
RAP1B-230ENST00000543697 ATP11AP98196 1134 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 ARID5AQ03989 594 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 SLC39A6Q13433 755 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 LRRC14Q15048 493 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 DEFB115Q30KQ5 88 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 ZNF394Q53GI3 561 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 KIAA0825Q8IV33 1275 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 EMILIN2Q9BXX0 1053 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 SMG9Q9H0W8 520 aaKnown RBP9.68□□□□□ -0.86
RAP1B-230ENST00000543697 ATG3Q9NT62 314 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 LAS1LQ9Y4W2 734 aaKnown RBP9.68□□□□□ -0.86
RAP1B-230ENST00000543697 TIAM2Q8IVF5 1701 aa9.68□□□□□ -0.86
RAP1B-230ENST00000543697 CEP290O15078 2479 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 MRC1P22897 1456 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 NEURL1BA8MQ27 555 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 LMNB1P20700 586 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 RACK1P63244 317 aaKnown RBP9.67□□□□□ -0.86
RAP1B-230ENST00000543697 PERM1Q5SV97 790 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 FCHSD1Q86WN1 690 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 THUMPD2Q9BTF0 503 aaKnown RBP9.67□□□□□ -0.86
RAP1B-230ENST00000543697 ACBD3Q9H3P7 528 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 SEC31BQ9NQW1 1179 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 KBTBD4Q9NVX7 518 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 GPN3Q9UHW5 284 aaPredicted RBP9.67□□□□□ -0.86
RAP1B-230ENST00000543697 GGA1Q9UJY5 639 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 CYP8B1Q9UNU6 501 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 CCDC88AQ3V6T2 1871 aa9.67□□□□□ -0.86
RAP1B-230ENST00000543697 SIPA1L3O60292 1781 aaPredicted RBP9.66□□□□□ -0.86
RAP1B-230ENST00000543697 LCE2BO14633 110 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 IGSF3O75054 1194 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 ACPPP15309 386 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 HMGB2P26583 209 aaKnown RBP9.66□□□□□ -0.86
RAP1B-230ENST00000543697 GBP2P32456 591 aaPredicted RBP9.66□□□□□ -0.86
RAP1B-230ENST00000543697 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
RAP1B-230ENST00000543697 LIG3P49916 1009 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 LMNB2Q03252 620 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 PCDH1Q08174 1060 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 AP3B2Q13367 1082 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 TAF7Q15545 349 aaPredicted RBP9.66□□□□□ -0.86
RAP1B-230ENST00000543697 SOGA3Q5TF21 947 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 PSAPL1Q6NUJ1 521 aa9.66□□□□□ -0.86
RAP1B-230ENST00000543697 FAM117BQ6P1L5 589 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms