RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 VPS53Q5VIR6 699 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 COPRSQ9NQ92 184 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.99□□□□□ -0.97
GNE-205ENST00000539815 ADD3Q9UEY8 706 aaKnown RBP8.99□□□□□ -0.97
GNE-205ENST00000539815 GOLIM4O00461 696 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 DYNC1LI2O43237 492 aaPredicted RBP8.99□□□□□ -0.97
GNE-205ENST00000539815 LPXNO60711 386 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 BCAR3O75815 825 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 ALAS1P13196 640 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 TMEM67Q5HYA8 995 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 TMEM31Q5JXX7 168 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 SNRNP48Q6IEG0 339 aaKnown RBP8.99□□□□□ -0.97
GNE-205ENST00000539815 GPAT2Q6NUI2 795 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 OTOP2Q7RTS6 562 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 PRDM6Q9NQX0 595 aa8.99□□□□□ -0.97
GNE-205ENST00000539815 AOX1Q06278 1338 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 MYL3P08590 195 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 PRAMEF19Q5SWL8 479 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 EEPD1Q7L9B9 569 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 DEFB128Q7Z7B8 93 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 MEIS3Q99687 375 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 DLEC1Q9Y238 1755 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 SOX1O00570 391 aaPredicted RBP8.98□□□□□ -0.97
GNE-205ENST00000539815 FAM47AQ5JRC9 791 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 SLC39A5Q6ZMH5 540 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 KIAA1211Q6ZU35 1233 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 CHST3Q7LGC8 479 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 TEX13BQ9BXU2 312 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 SLC4A4Q9Y6R1 1079 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 PTPDC1A2A3K4 754 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 ASB14A6NK59 587 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 TSPY3P0CV98 308 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 TSPY8P0CW00 308 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 SMAD3P84022 425 aaKnown RBP8.98□□□□□ -0.97
GNE-205ENST00000539815 FAM117BQ6P1L5 589 aa8.98□□□□□ -0.97
GNE-205ENST00000539815 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
GNE-205ENST00000539815 SNED1Q8TER0 1413 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 CSPG5O95196 566 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 VCAM1P19320 739 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 HOXA7P31268 230 aaPredicted RBP8.97□□□□□ -0.97
GNE-205ENST00000539815 ZAP70P43403 619 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 CCL23P55773 120 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 BFSP2Q13515 415 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 DBNDD2Q9BQY9 259 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 TINF2Q9BSI4 451 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 HIPK3Q9H422 1215 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 IL1RAPL2Q9NP60 686 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 BCORQ6W2J9 1755 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 TSPY2A6NKD2 308 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 CABYRO75952 493 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 CASP7P55210 303 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 RABL6Q3YEC7 729 aaPredicted RBP8.97□□□□□ -0.97
GNE-205ENST00000539815 ADAMTS19Q8TE59 1207 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 ARNTL2Q8WYA1 636 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
GNE-205ENST00000539815 MOV10L1Q9BXT6 1211 aaKnown RBP8.97□□□□□ -0.97
GNE-205ENST00000539815 UPF3BQ9BZI7 483 aaKnown RBP8.97□□□□□ -0.97
GNE-205ENST00000539815 MTUS1Q9ULD2 1270 aa8.97□□□□□ -0.97
GNE-205ENST00000539815 WDR46O15213 610 aaKnown RBP8.96□□□□□ -0.97
GNE-205ENST00000539815 ACRP10323 421 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 SLC1A4P43007 532 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 DYNLL1P63167 89 aaKnown RBP8.96□□□□□ -0.97
GNE-205ENST00000539815 SPOUT1Q5T280 376 aaKnown RBP8.96□□□□□ -0.97
GNE-205ENST00000539815 FAM109BQ6ICB4 259 aaPredicted RBP8.96□□□□□ -0.97
GNE-205ENST00000539815 NSUN4Q96CB9 384 aaKnown RBP8.96□□□□□ -0.97
GNE-205ENST00000539815 ATG4CQ96DT6 458 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 KIAA1683Q9H0B3 1180 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 NAPBQ9H115 298 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 CRISPLD2Q9H0B8 497 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 CERS4Q9HA82 394 aa8.96□□□□□ -0.97
GNE-205ENST00000539815 DDX4Q9NQI0 724 aaKnown RBP8.96□□□□□ -0.97
GNE-205ENST00000539815 PDE4DQ08499 809 aa8.96□□□□□ -0.98
GNE-205ENST00000539815 LRRC41Q15345 812 aa8.96□□□□□ -0.98
GNE-205ENST00000539815 MICAL1Q8TDZ2 1067 aa8.96□□□□□ -0.98
GNE-205ENST00000539815 MOXD2PA6NHM9 499 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 USP17L12C9JPN9 530 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 USP17L21D6R901 530 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 STK25O00506 426 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 PGK2P07205 417 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 PI16Q6UXB8 463 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 SUGP1Q8IWZ8 645 aaKnown RBP8.95□□□□□ -0.98
GNE-205ENST00000539815 ANKRD44Q8N8A2 993 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 RBPJLQ9UBG7 517 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 CLIP2Q9UDT6 1046 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 SALL1Q9NSC2 1324 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 ZDBF2Q9HCK1 2354 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 RANBP6O60518 1105 aaKnown RBP8.95□□□□□ -0.98
GNE-205ENST00000539815 TNFAIP2Q03169 654 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 BMS1Q14692 1282 aaKnown RBP8.95□□□□□ -0.98
GNE-205ENST00000539815 PTPROQ16827 1216 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 CATSPERGQ6ZRH7 1159 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 ZBTB9Q96C00 473 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 SLF1Q9BQI6 1058 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 BOLA2Q9H3K6 86 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 ABHD16BQ9H3Z7 469 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 POLR3EQ9NVU0 708 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 FLT1P17948 1338 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 LTBP1Q14766 1721 aa8.95□□□□□ -0.98
GNE-205ENST00000539815 ATP2A2P16615 1042 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms