RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 MKRN4PQ13434 485 aaPredicted RBP9.99□□□□□ -0.81
DDB1-208ENST00000537120 KIAA1755Q5JYT7 1200 aa9.99□□□□□ -0.81
DDB1-208ENST00000537120 FAM83BQ5T0W9 1011 aa9.99□□□□□ -0.81
DDB1-208ENST00000537120 C7orf61Q8IZ16 206 aa9.99□□□□□ -0.81
DDB1-208ENST00000537120 SHCBP1Q8NEM2 672 aa9.99□□□□□ -0.81
DDB1-208ENST00000537120 OTUD7AQ8TE49 926 aaPredicted RBP9.99□□□□□ -0.81
DDB1-208ENST00000537120 DIS3LQ8TF46 1054 aaKnown RBP9.99□□□□□ -0.81
DDB1-208ENST00000537120 SEC62Q99442 399 aaKnown RBP9.99□□□□□ -0.81
DDB1-208ENST00000537120 NAPBQ9H115 298 aa9.99□□□□□ -0.81
DDB1-208ENST00000537120 RWDD1Q9H446 243 aaPredicted RBP9.99□□□□□ -0.81
DDB1-208ENST00000537120 OGDHLQ9ULD0 1010 aa9.99□□□□□ -0.81
DDB1-208ENST00000537120 MYH7P12883 1935 aa9.99□□□□□ -0.81
DDB1-208ENST00000537120 F5H6K3 240 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 ZBED4O75132 1171 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 PRDM1O75626 825 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 TSPY3P0CV98 308 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 TSPY8P0CW00 308 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 RASA1P20936 1047 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 ADORA2AP29274 412 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 STAT3P40763 770 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 KLRC3Q07444 240 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 GRB14Q14449 540 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 KCTD2Q14681 263 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 MAP3K21Q5TCX8 1036 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 B4GALNT3Q6L9W6 998 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 NPLOC4Q8TAT6 608 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 MMP19Q99542 508 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 FBXO28Q9NVF7 368 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 NYAP2Q9P242 653 aa9.98□□□□□ -0.81
DDB1-208ENST00000537120 TRIM6-TRIM34B2RNG4 842 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 MSCO60682 206 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 HOXC6P09630 235 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 TFAP4Q01664 338 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 IKQ13123 557 aaPredicted RBP9.97□□□□□ -0.81
DDB1-208ENST00000537120 TMEM132BQ14DG7 1078 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 ARRDC4Q8NCT1 418 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 PI4K2BQ8TCG2 481 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 EVI5LQ96CN4 794 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 DDX11Q96FC9 970 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 NUP88Q99567 741 aaPredicted RBP9.97□□□□□ -0.81
DDB1-208ENST00000537120 TOMM22Q9NS69 142 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 FLRT1Q9NZU1 646 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 RBM27Q9P2N5 1060 aaKnown RBP9.97□□□□□ -0.81
DDB1-208ENST00000537120 STAP2Q9UGK3 403 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 ZMYND8Q9ULU4 1186 aaPredicted RBP9.97□□□□□ -0.81
DDB1-208ENST00000537120 TRIOBPQ9H2D6 2365 aa9.97□□□□□ -0.81
DDB1-208ENST00000537120 VWA5AO00534 786 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 TTLL1O95922 423 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 COPB2P35606 906 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 PPARAQ07869 468 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 HDAC1Q13547 482 aaPredicted RBP9.96□□□□□ -0.82
DDB1-208ENST00000537120 AAMPQ13685 434 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 FAM47AQ5JRC9 791 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 PRAMEF19Q5SWL8 479 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 ANO1Q5XXA6 986 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 PRPF38AQ8NAV1 312 aaKnown RBP9.96□□□□□ -0.82
DDB1-208ENST00000537120 RILPL2Q969X0 211 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 KIFC2Q96AC6 838 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 CHMP4CQ96CF2 233 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 SLF1Q9BQI6 1058 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 SENP6Q9GZR1 1112 aaPredicted RBP9.96□□□□□ -0.82
DDB1-208ENST00000537120 DDX20Q9UHI6 824 aaKnown RBP9.96□□□□□ -0.82
DDB1-208ENST00000537120 PPP1R9AQ9ULJ8 1098 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 MKI67P46013 3256 aaKnown RBP9.96□□□□□ -0.82
DDB1-208ENST00000537120 PLXNB2O15031 1838 aa9.96□□□□□ -0.82
DDB1-208ENST00000537120 TSPY2A6NKD2 308 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 RANBP6O60518 1105 aaKnown RBP9.95□□□□□ -0.82
DDB1-208ENST00000537120 COBLO75128 1261 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 NDUFB10O96000 172 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 PGK2P07205 417 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 SYN1P17600 705 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 PDE1AP54750 535 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 PPP4R3BQ5MIZ7 849 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 OLFML2BQ68BL8 750 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 SLFN13Q68D06 897 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 LHX8Q68G74 356 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 SNRNP48Q6IEG0 339 aaKnown RBP9.95□□□□□ -0.82
DDB1-208ENST00000537120 CCDC129Q6ZRS4 1044 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 RIOX2Q8IUF8 465 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 ABRAQ8N0Z2 381 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 NEDD1Q8NHV4 660 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 CEP95Q96GE4 821 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.95□□□□□ -0.82
DDB1-208ENST00000537120 LNPKQ9C0E8 428 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 EPB41L4AQ9HCS5 686 aaPredicted RBP9.95□□□□□ -0.82
DDB1-208ENST00000537120 MTMR4Q9NYA4 1195 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 FEM1BQ9UK73 627 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 MTMR7Q9Y216 660 aa9.95□□□□□ -0.82
DDB1-208ENST00000537120 DDX60LQ5H9U9 1706 aaKnown RBP9.94□□□□□ -0.82
DDB1-208ENST00000537120 KBTBD13C9JR72 458 aa9.94□□□□□ -0.82
DDB1-208ENST00000537120 BMP3P12645 472 aa9.94□□□□□ -0.82
DDB1-208ENST00000537120 FXR1P51114 621 aaKnown RBP eCLIP9.94□□□□□ -0.822e-6■■■□□ 17.4
DDB1-208ENST00000537120 ATN1P54259 1190 aaPredicted RBP9.94□□□□□ -0.82
DDB1-208ENST00000537120 CTDSPL2Q05D32 466 aa9.94□□□□□ -0.82
DDB1-208ENST00000537120 RRP12Q5JTH9 1297 aaKnown RBP9.94□□□□□ -0.82
DDB1-208ENST00000537120 GJC2Q5T442 439 aaPredicted RBP9.94□□□□□ -0.82
DDB1-208ENST00000537120 LRRC47Q8N1G4 583 aaKnown RBP9.94□□□□□ -0.82
DDB1-208ENST00000537120 CHURC1Q8WUH1 139 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms