RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 SH3RF1Q7Z6J0 888 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 NCAPG2Q86XI2 1143 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 HERVK_113Q902F9 699 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 FERMT2Q96AC1 680 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 MEIS3Q99687 375 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 TINF2Q9BSI4 451 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 PBX4Q9BYU1 374 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 SWAP70Q9UH65 585 aa6.82□□□□□ -1.32
CTSB-216ENST00000530290 A0A0U1RQG5 324 aaPredicted RBP6.81□□□□□ -1.32
CTSB-216ENST00000530290 COBLO75128 1261 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 DUSP11O75319 330 aaKnown RBP6.81□□□□□ -1.32
CTSB-216ENST00000530290 FLOT1O75955 427 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 GNAI2P04899 355 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 CYP2E1P05181 493 aaPredicted RBP6.81□□□□□ -1.32
CTSB-216ENST00000530290 PFKMP08237 780 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 CYP7A1P22680 504 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 SHMT1P34896 483 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 ACLYP53396 1101 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 GABPAQ06546 454 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 SLFN5Q08AF3 891 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 TNNI3KQ59H18 835 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 ZNF467Q7Z7K2 595 aaPredicted RBP6.81□□□□□ -1.32
CTSB-216ENST00000530290 RIOX2Q8IUF8 465 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 MAGEB6Q8N7X4 407 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 CCDC17Q96LX7 622 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 MMP19Q99542 508 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.81□□□□□ -1.328e-8■■■■■ 37.7
CTSB-216ENST00000530290 LRFN3Q9BTN0 628 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 SLC28A3Q9HAS3 691 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 SAP30BPQ9UHR5 308 aaKnown RBP6.81□□□□□ -1.32
CTSB-216ENST00000530290 FAM184BQ9ULE4 1060 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 COG5Q9UP83 839 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 NDUFB9Q9Y6M9 179 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 FPGT-TNNI3KV9GXZ4 949 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 CHD7Q9P2D1 2997 aa6.81□□□□□ -1.32
CTSB-216ENST00000530290 SYNRGQ9UMZ2 1314 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 ERC2O15083 957 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 IPO8O15397 1037 aaKnown RBP6.8□□□□□ -1.32
CTSB-216ENST00000530290 GTPBP6O43824 516 aaPredicted RBP6.8□□□□□ -1.32
CTSB-216ENST00000530290 CABYRO75952 493 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 POU3F3P20264 500 aaPredicted RBP6.8□□□□□ -1.32
CTSB-216ENST00000530290 ITGB8P26012 769 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 EPHB4P54760 987 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 PLS1Q14651 629 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 TTF1Q15361 905 aaPredicted RBP6.8□□□□□ -1.32
CTSB-216ENST00000530290 TMEM240Q5SV17 173 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 ANO1Q5XXA6 986 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.8□□□□□ -1.32
CTSB-216ENST00000530290 ADGRA1Q86SQ6 560 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 AMOTL1Q8IY63 956 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 KLHDC9Q8NEP7 349 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 ACER1Q8TDN7 264 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 CRNKL1Q9BZJ0 848 aaKnown RBP6.8□□□□□ -1.32
CTSB-216ENST00000530290 VCPKMTQ9H867 229 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 IL23AQ9NPF7 189 aa6.8□□□□□ -1.32
CTSB-216ENST00000530290 NOB1Q9ULX3 412 aaKnown RBP6.8□□□□□ -1.32
CTSB-216ENST00000530290 LRRC37A2A6NM11 1700 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 ARVCFO00192 962 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 APBB1O00213 710 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 IDH1O75874 414 aaKnown RBP6.79□□□□□ -1.32
CTSB-216ENST00000530290 PGK1P00558 417 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
CTSB-216ENST00000530290 ZNF865P0CJ78 1059 aaPredicted RBP6.79□□□□□ -1.32
CTSB-216ENST00000530290 GUCY1A2P33402 732 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 CDK7P50613 346 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 NKX3-2P78367 333 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 ICA1Q05084 483 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 OS9Q13438 667 aaPredicted RBP6.79□□□□□ -1.32
CTSB-216ENST00000530290 SEPT2Q15019 361 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 SHROOM1Q2M3G4 852 aaPredicted RBP6.79□□□□□ -1.32
CTSB-216ENST00000530290 ZNF792Q3KQV3 632 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 TMEM31Q5JXX7 168 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 MAMDC4Q6UXC1 1216 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 FAM126BQ8IXS8 530 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 RPUSD2Q8IZ73 545 aaKnown RBP6.79□□□□□ -1.32
CTSB-216ENST00000530290 ATG4CQ96DT6 458 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 TEX13BQ9BXU2 312 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 UPF3AQ9H1J1 476 aaKnown RBP6.79□□□□□ -1.32
CTSB-216ENST00000530290 ABHD16BQ9H3Z7 469 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 PRDM12Q9H4Q4 367 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 GOPCQ9HD26 462 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 ADAMTS5Q9UNA0 930 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 TMX2Q9Y320 296 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 PCDHA11Q9Y5I1 949 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 MYH7P12883 1935 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 CHD9Q3L8U1 2897 aa6.79□□□□□ -1.32
CTSB-216ENST00000530290 GREB1LQ9C091 1923 aaPredicted RBP6.78□□□□□ -1.32
CTSB-216ENST00000530290 BAZ2AQ9UIF9 1905 aaKnown RBP6.78□□□□□ -1.32
CTSB-216ENST00000530290 MPHOSPH10O00566 681 aaKnown RBP6.78□□□□□ -1.32
CTSB-216ENST00000530290 ZEB2O60315 1214 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 IGFBP4P22692 258 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 STAT3P40763 770 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 ZAP70P43403 619 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 MRE11P49959 708 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 GJA9P57773 515 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 TMEM132BQ14DG7 1078 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 KCNA10Q16322 511 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 PPP2R2DQ66LE6 453 aa6.78□□□□□ -1.32
CTSB-216ENST00000530290 CCSAPQ6IQ19 270 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms