RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 BTBD7Q9P203 1132 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 GABRQQ9UN88 632 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 ADAMTS5Q9UNA0 930 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 PTCH2Q9Y6C5 1203 aa14.96□□□□□ -0.01
CCDC90B-216ENST00000529856 DOCK3Q8IZD9 2030 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 CDC45O75419 566 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 CYP21A2P08686 494 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 MB21D1Q8N884 522 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 COA7Q96BR5 231 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 ATG4CQ96DT6 458 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 TTC14Q96N46 770 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 KRT23Q9C075 422 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 LSG1Q9H089 658 aaKnown RBP14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 CNNM2Q9H8M5 875 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 FBXO28Q9NVF7 368 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 ZSWIM5Q9P217 1185 aa14.95□□□□□ -0.02
CCDC90B-216ENST00000529856 PARP14Q460N5 1801 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 CCDC85CA6NKD9 419 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 B4E1Z4 1266 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 KDM4AO75164 1064 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 BMP3P12645 472 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 MAPK4P31152 587 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 FLT3LGP49771 235 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 CCNA1P78396 465 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 PRKCZQ05513 592 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 RCSD1Q6JBY9 416 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 CASC1Q6TDU7 716 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 GMCL1Q96IK5 515 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 TMEM47Q9BQJ4 181 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 PORCNQ9H237 461 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 FEM1BQ9UK73 627 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 GJD2Q9UKL4 321 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 RBM8AQ9Y5S9 174 aaKnown RBP14.94□□□□□ -0.02
CCDC90B-216ENST00000529856 TOP1P11387 765 aaKnown RBP14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 MCCP23508 829 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 CCDC178Q5BJE1 867 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 IQCA1Q86XH1 822 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 DGKHQ86XP1 1220 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 CCAR1Q8IX12 1150 aaKnown RBP14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 PRPF38AQ8NAV1 312 aaKnown RBP14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 RAET1EQ8TD07 263 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 ARMC5Q96C12 935 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 SLF1Q9BQI6 1058 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 ZKSCAN3Q9BRR0 538 aa14.93□□□□□ -0.02
CCDC90B-216ENST00000529856 HTTP42858 3142 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 VWA5AO00534 786 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 CAPN15O75808 1086 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 SLC1A4P43007 532 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 IRF5Q13568 498 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 SLC9C1Q4G0N8 1177 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 PLEKHH3Q7Z736 793 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 ANKS1AQ92625 1134 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 ZSCAN10Q96SZ4 725 aaPredicted RBP14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 MOV10L1Q9BXT6 1211 aaKnown RBP14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 SPATC1LQ9H0A9 340 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 ANO2Q9NQ90 1003 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 TAF6LQ9Y6J9 622 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 A0A0G2JMZ2 1700 aa14.92□□□□□ -0.02
CCDC90B-216ENST00000529856 TMEM232C9JQI7 657 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 E7EWF7 191 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 TRDNQ13061 729 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 TMEM132BQ14DG7 1078 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 NECTIN1Q15223 517 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 STOX1Q6ZVD7 989 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 GPR142Q7Z601 462 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 NBPF11Q86T75 865 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 SHCBP1Q8NEM2 672 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 REPS2Q8NFH8 660 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 CHURC1Q8WUH1 139 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 DCAF4Q8WV16 495 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 CHMP4CQ96CF2 233 aa14.91□□□□□ -0.02
CCDC90B-216ENST00000529856 PLXNB2O15031 1838 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 COL11A1P12107 1806 aaPredicted RBP14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 ADCY3O60266 1144 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 PLA2G6O60733 806 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 GRK4P32298 578 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 PLS1Q14651 629 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 MORN1Q5T089 497 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 CYB5R4Q7L1T6 521 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 FAM160B2Q86V87 743 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 ENAHQ8N8S7 591 aaPredicted RBP14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 NCOA7Q8NI08 942 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 PXYLP1Q8TE99 480 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 SH3TC2Q8TF17 1288 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 USP6NLQ92738 828 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 KIFC2Q96AC6 838 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 ZNF333Q96JL9 665 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 NUDT12Q9BQG2 462 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 MTMR7Q9Y216 660 aa14.9□□□□□ -0.02
CCDC90B-216ENST00000529856 SLC15A5A6NIM6 579 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 SLC27A2O14975 620 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 ZBED4O75132 1171 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 SLC25A27O95847 323 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 ERCC3P19447 782 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 PTPREP23469 700 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 STAT3P40763 770 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 STAT2P52630 851 aa14.89□□□□□ -0.03
CCDC90B-216ENST00000529856 WDR78Q5VTH9 848 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms