RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 ATP6V1G2O95670 118 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 PYGLP06737 847 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 QPCTQ16769 361 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 TBC1D25Q3MII6 688 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 BRAPQ7Z569 592 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 CCDC50Q8IVM0 306 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 ABHD10Q9NUJ1 306 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 L3MBTL1Q9Y468 752 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
SPIDR-224ENST00000524126 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-224ENST00000524126 PSMD14O00487 310 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 SCTRP47872 440 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 SLC39A6Q13433 755 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 POSTNQ15063 836 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 MIS18BP1Q6P0N0 1132 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 TMTC1Q8IUR5 882 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 CNGA4Q8IV77 575 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 ACTR5Q9H9F9 607 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 SERTAD1Q9UHV2 236 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 CCDC9Q9Y3X0 531 aaKnown RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 CEMIPQ8WUJ3 1361 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 ANKRD18BA2A2Z9 1011 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 ATP5JP18859 108 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 NR1D1P20393 614 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 GRIN1Q05586 938 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 PTPAQ15257 358 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 ZNF513Q8N8E2 541 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 NUP88Q99567 741 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 LRRC37A3O60309 1634 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 ZNF233A6NK53 670 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 E7EWF7 191 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 FAM107AO95990 144 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 CKAP4Q07065 602 aaKnown RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 MORC3Q14149 939 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 PAPD7Q5XG87 772 aaKnown RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 CYP26C1Q6V0L0 522 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 HOOK2Q96ED9 719 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 CCDC43Q96MW1 224 aaKnown RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 EHD2Q9NZN4 543 aa11.39□□□□□ -0.59
SPIDR-224ENST00000524126 G3BP2Q9UN86 482 aaKnown RBP11.39□□□□□ -0.59
SPIDR-224ENST00000524126 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 MGRN1O60291 552 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 SMNDC1O75940 238 aaKnown RBP eCLIP11.38□□□□□ -0.595e-8■□□□□ 11.3
SPIDR-224ENST00000524126 ARID4AP29374 1257 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 HPDP32754 393 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 MDH1P40925 334 aaKnown RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 HERVK_113P62684 666 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 ELF3P78545 371 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 SF3A3Q12874 501 aaKnown RBP eCLIP11.38□□□□□ -0.599e-19■■■■■ 36
SPIDR-224ENST00000524126 G3BP1Q13283 466 aaKnown RBP eCLIP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 DRP2Q13474 957 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 CCDC122Q5T0U0 273 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 KIAA1328Q86T90 577 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 SMYD4Q8IYR2 804 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 ZNF274Q96GC6 653 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 ZNF570Q96NI8 536 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 AGXT2Q9BYV1 514 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 TTC36A6NLP5 189 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 RNMTO43148 476 aaKnown RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 KIF4AO95239 1232 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 NDUFA10O95299 355 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 CD44P16070 742 aaKnown RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 FECHP22830 423 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 CASP1P29466 404 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 PLCD1P51178 756 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 DDX46Q7L014 1031 aaKnown RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 MLKLQ8NB16 471 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 FAM210AQ96ND0 272 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 SPAG5Q96R06 1193 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 ZCWPW1Q9H0M4 648 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 C9orf78Q9NZ63 289 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 CHPF2Q9P2E5 772 aa11.38□□□□□ -0.59
SPIDR-224ENST00000524126 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-224ENST00000524126 CYP27B1O15528 508 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 ANP32DO95626 131 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 PIP4K2AP48426 406 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-224ENST00000524126 BYSLQ13895 437 aaKnown RBP11.37□□□□□ -0.59
SPIDR-224ENST00000524126 SLC5A9Q2M3M2 681 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 HIBCHQ6NVY1 386 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-224ENST00000524126 TOM1L2Q6ZVM7 507 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 UBE3BQ7Z3V4 1068 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 CUL5Q93034 780 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 C15orf41Q9Y2V0 281 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 A6NNZ2 444 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 POLR2DO15514 142 aaKnown RBP11.37□□□□□ -0.59
SPIDR-224ENST00000524126 HMGB1P09429 215 aaKnown RBP11.37□□□□□ -0.59
SPIDR-224ENST00000524126 LINGO3P0C6S8 592 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 FAM153BP0C7A2 387 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 KRT9P35527 623 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 CWF19L2Q2TBE0 894 aaKnown RBP11.37□□□□□ -0.59
SPIDR-224ENST00000524126 TUBB8Q3ZCM7 444 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 FAM153CQ494X1 144 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 MCMDC2Q4G0Z9 681 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 AKAP4Q5JQC9 854 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
SPIDR-224ENST00000524126 TTC39AQ5SRH9 613 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms