RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 USP17L21D6R901 530 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 MAP2K7O14733 419 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 COL1A1P02452 1464 aaPredicted RBP14.59□□□□□ -0.07
PHF3-212ENST00000515594 PRCPP42785 496 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 TROAPQ12815 778 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 FILIP1LQ4L180 1135 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 KANK3Q6NY19 840 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 FAM205AQ6ZU69 1335 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 KCNJ18B7U540 433 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 COPB1P53618 953 aaKnown RBP14.59□□□□□ -0.07
PHF3-212ENST00000515594 KCNJ12Q14500 433 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 TRIM34Q9BYJ4 488 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 DUSP10Q9Y6W6 482 aa14.59□□□□□ -0.07
PHF3-212ENST00000515594 TTC26A0AVF1 554 aa14.58□□□□□ -0.07
PHF3-212ENST00000515594 E2F4Q16254 413 aa14.58□□□□□ -0.07
PHF3-212ENST00000515594 ZNF34Q8IZ26 560 aa14.58□□□□□ -0.07
PHF3-212ENST00000515594 CPVLQ9H3G5 476 aa14.58□□□□□ -0.07
PHF3-212ENST00000515594 ITGB4P16144 1822 aa14.58□□□□□ -0.08
PHF3-212ENST00000515594 NLRP5P59047 1200 aa14.58□□□□□ -0.08
PHF3-212ENST00000515594 FKBP15Q5T1M5 1219 aa14.58□□□□□ -0.08
PHF3-212ENST00000515594 CATIPQ7Z7H3 387 aa14.58□□□□□ -0.08
PHF3-212ENST00000515594 TNFRSF25Q93038 417 aa14.58□□□□□ -0.08
PHF3-212ENST00000515594 NAPGQ99747 312 aaPredicted RBP14.58□□□□□ -0.08
PHF3-212ENST00000515594 TULP2O00295 520 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 ZNF185O15231 689 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 PDXDC2PQ6P474 469 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 IRF2BP1Q8IU81 584 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 LRRC15Q8TF66 581 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 GSDMAQ96QA5 445 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 RIOK1Q9BRS2 568 aaKnown RBP14.57□□□□□ -0.08
PHF3-212ENST00000515594 L1RE1Q9UN81 338 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 DOCK2Q92608 1830 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 PNPLA7Q6ZV29 1317 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 ATP1A1P05023 1023 aaKnown RBP14.57□□□□□ -0.08
PHF3-212ENST00000515594 PAK1Q13153 545 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 CASP8Q14790 479 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 TCP11X2Q5H9J9 407 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 BICDL1Q6ZP65 573 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 CNGA4Q8IV77 575 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 ELOA2Q8IYF1 753 aaPredicted RBP14.57□□□□□ -0.08
PHF3-212ENST00000515594 RASSF8Q8NHQ8 419 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 RNF41Q9H4P4 317 aaPredicted RBP14.57□□□□□ -0.08
PHF3-212ENST00000515594 RABEP2Q9H5N1 569 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 FEZ2Q9UHY8 353 aaPredicted RBP14.57□□□□□ -0.08
PHF3-212ENST00000515594 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.08
PHF3-212ENST00000515594 CICQ96RK0 1608 aaPredicted RBP14.57□□□□□ -0.08
PHF3-212ENST00000515594 CNTNAP5Q8WYK1 1306 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 CTAGE15A4D2H0 777 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 RCCD1A6NED2 376 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 CTAGE8P0CG41 777 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 CTAGE6Q86UF2 777 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 CTAGE4Q8IX94 777 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 TXLNBQ8N3L3 684 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 HPS3Q969F9 1004 aa14.57□□□□□ -0.08
PHF3-212ENST00000515594 TIAM2Q8IVF5 1701 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 IGHMBP2P38935 993 aaKnown RBP14.56□□□□□ -0.08
PHF3-212ENST00000515594 TYW1BQ6NUM6 668 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 MMS19Q96T76 1030 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 AGPAT5Q9NUQ2 364 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 BCORQ6W2J9 1755 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 XBP1P17861 261 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 ATP2C1P98194 919 aaPredicted RBP14.56□□□□□ -0.08
PHF3-212ENST00000515594 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 BRD3Q15059 726 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 KCTD19Q17RG1 926 aaPredicted RBP14.56□□□□□ -0.08
PHF3-212ENST00000515594 CTR9Q6PD62 1173 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 TMTC3Q6ZXV5 915 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 CEP112Q8N8E3 955 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 NID2Q14112 1375 aa14.56□□□□□ -0.08
PHF3-212ENST00000515594 PRPF3O43395 683 aaKnown RBP14.55□□□□□ -0.08
PHF3-212ENST00000515594 ATP8B1O43520 1251 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 GNAT2P19087 354 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 FAM193AP78312 1265 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 TMTC2Q8N394 836 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 STAG2Q8N3U4 1231 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 SMCR8Q8TEV9 937 aaPredicted RBP14.55□□□□□ -0.08
PHF3-212ENST00000515594 PSMB7Q99436 277 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 TMEM60Q9H2L4 133 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 TFCP2L1Q9NZI6 479 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 MYO6Q9UM54 1294 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
PHF3-212ENST00000515594 TNNT3P45378 269 aaPredicted RBP14.55□□□□□ -0.08
PHF3-212ENST00000515594 IQUBQ8NA54 791 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 DRC1Q96MC2 740 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 LACRTQ9GZZ8 138 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 B4DLN1 442 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 NDUFA10O95299 355 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 MYBL2P10244 700 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 HERVK_113P62684 666 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 HDXQ7Z353 690 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 IQCA1Q86XH1 822 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 MSANTD4Q8NCY6 345 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 CTAGE1Q96RT6 745 aa14.55□□□□□ -0.08
PHF3-212ENST00000515594 PLEKHG2Q9H7P9 1386 aa14.54□□□□□ -0.08
PHF3-212ENST00000515594 ANKRD36CQ5JPF3 1778 aa14.54□□□□□ -0.08
PHF3-212ENST00000515594 PARP1P09874 1014 aaKnown RBP14.54□□□□□ -0.08
PHF3-212ENST00000515594 AMPD2Q01433 879 aa14.54□□□□□ -0.08
PHF3-212ENST00000515594 GPS2Q13227 327 aa14.54□□□□□ -0.08
PHF3-212ENST00000515594 FERMT2Q96AC1 680 aa14.54□□□□□ -0.08
PHF3-212ENST00000515594 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms