RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SLFN13Q68D06 897 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.62□□□□□ -0.39
PFDN1-204ENST00000512707 WASF1Q92558 559 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 LPAR1Q92633 364 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 SLC10A4Q96EP9 437 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 ELP3Q9H9T3 547 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 NCOA5Q9HCD5 579 aaKnown RBP12.62□□□□□ -0.39
PFDN1-204ENST00000512707 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.62□□□□□ -0.39
PFDN1-204ENST00000512707 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
PFDN1-204ENST00000512707 FZD1Q9UP38 647 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 SNCAIPQ9Y6H5 919 aa12.62□□□□□ -0.39
PFDN1-204ENST00000512707 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
PFDN1-204ENST00000512707 PDHBP11177 359 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 PDIA4P13667 645 aaKnown RBP12.61□□□□□ -0.39
PFDN1-204ENST00000512707 PDCP20941 246 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 ECE1P42892 770 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 SLC4A3P48751 1232 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 SSRP1Q08945 709 aaKnown RBP12.61□□□□□ -0.39
PFDN1-204ENST00000512707 SPP2Q13103 211 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
PFDN1-204ENST00000512707 ZYXQ15942 572 aaKnown RBP12.61□□□□□ -0.39
PFDN1-204ENST00000512707 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 USP17L2Q6R6M4 530 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 FAM184AQ8NB25 1140 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
PFDN1-204ENST00000512707 PTPDC1A2A3K4 754 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 SPDYE5A6NIY4 337 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 KLRF2D3W0D1 207 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 FOXN1O15353 648 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 NDUFB10O96000 172 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 SNHG28P0DPA3 235 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 BMP3P12645 472 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 IFNAR1P17181 557 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
PFDN1-204ENST00000512707 BACE1P56817 501 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 ZNF543Q08ER8 600 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 PPIL2Q13356 520 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 MTMR2Q13614 643 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 SIAH1Q8IUQ4 282 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.6□□□□□ -0.39
PFDN1-204ENST00000512707 SEC63Q9UGP8 760 aaKnown RBP12.6□□□□□ -0.39
PFDN1-204ENST00000512707 MYH4Q9Y623 1939 aa12.6□□□□□ -0.39
PFDN1-204ENST00000512707 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
PFDN1-204ENST00000512707 CXCL11O14625 94 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 WDR46O15213 610 aaKnown RBP12.59□□□□□ -0.39
PFDN1-204ENST00000512707 XBP1P17861 261 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 CDC27P30260 824 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 MOB2Q70IA6 237 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
PFDN1-204ENST00000512707 SPICE1Q8N0Z3 855 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
PFDN1-204ENST00000512707 CHURC1Q8WUH1 139 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
PFDN1-204ENST00000512707 SPZ1Q9BXG8 430 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 SLC26A6Q9BXS9 759 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 RNF26Q9BY78 433 aaPredicted RBP12.59□□□□□ -0.39
PFDN1-204ENST00000512707 GPCPD1Q9NPB8 672 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 AFG3L2Q9Y4W6 797 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 FRMPD2Q68DX3 1309 aaPredicted RBP12.59□□□□□ -0.39
PFDN1-204ENST00000512707 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
PFDN1-204ENST00000512707 OTOFQ9HC10 1997 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
PFDN1-204ENST00000512707 GOLGA8HP0CJ92 632 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 GJB2P29033 226 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 STAT2P52630 851 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 HUNKP57058 714 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 FMR1Q06787 632 aaKnown RBP eCLIP12.58□□□□□ -0.4
PFDN1-204ENST00000512707 TRAF1Q13077 416 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 TRIM29Q14134 588 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 CCDC82Q8N4S0 544 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 OPTNQ96CV9 577 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 ORC3Q9UBD5 711 aaPredicted RBP12.58□□□□□ -0.4
PFDN1-204ENST00000512707 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
PFDN1-204ENST00000512707 TMEM88BA6NKF7 163 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 TMEM232C9JQI7 657 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 PLEKHA8P1O95397 391 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 DEXIO95424 95 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 HMGCS2P54868 508 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 ST3GAL1Q11201 340 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 PABPC4Q13310 644 aaKnown RBP eCLIP12.57□□□□□ -0.4
PFDN1-204ENST00000512707 SNAPC2Q13487 334 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 CST9Q5W186 159 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
PFDN1-204ENST00000512707 FASTKD5Q7L8L6 764 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms