RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SLC52A2Q9HAB3 445 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 ZSWIM6Q9HCJ5 1215 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 BMP2KQ9NSY1 1161 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 LRRC4BQ9NT99 713 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 HOXC10Q9NYD6 342 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 SEL1LQ9UBV2 794 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 CCNL1Q9UK58 526 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 TOGARAM1Q9Y4F4 1720 aa5.78□□□□□ -1.48
TRAPPC11-208ENST00000511955 BTBD11A6QL63 1104 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 TOR1BO14657 336 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 KCNQ3O43525 872 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 PGRP06401 933 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 STIP1P31948 543 aaKnown RBP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 ATP6V1AP38606 617 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 UBXN2AP68543 259 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 FKBP4Q02790 459 aaKnown RBP eCLIP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 STK3Q13188 491 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 LAMC2Q13753 1193 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 R3HDM1Q15032 1099 aaKnown RBP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 SWI5Q1ZZU3 235 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 FAM180BQ6P0A1 224 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 BTN2A1Q7KYR7 527 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 EEPD1Q7L9B9 569 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 ELOA2Q8IYF1 753 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 TTC5Q8N0Z6 440 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 GPRASP2Q96D09 838 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 CDK5RAP3Q96JB5 506 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 CAMKK2Q96RR4 588 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 FAM167BQ9BTA0 163 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 ASPSCR1Q9BZE9 553 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 PLCB1Q9NQ66 1216 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 TMEM260Q9NX78 707 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 PGAP2Q9UHJ9 254 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 FAM50BQ9Y247 325 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 AFG3L2Q9Y4W6 797 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 CD2APQ9Y5K6 639 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 BCL9O00512 1426 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 SYNDIG1LA6NDD5 238 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 ERVV-2B6SEH9 535 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 ALG1L2C9J202 215 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 SPTLC1O15269 473 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 KIF20AO95235 890 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 ARIH2O95376 493 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 GUCY2FP51841 1108 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 NEK2P51955 445 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 CLDN10P78369 228 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 ROR1Q01973 937 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 RAB33AQ14088 237 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 TAF1CQ15572 869 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 CT47A1Q5JQC4 288 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 SWSAP1Q6NVH7 229 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 C1orf228Q6PIY5 440 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 RTL10Q7L3V2 364 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 TRIM22Q8IYM9 498 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 SIX5Q8N196 739 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 TRIML1Q8N9V2 468 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 LRRN4Q8WUT4 740 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 GIMAP1Q8WWP7 306 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 EMID1Q96A84 441 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 AGAP3Q96P47 875 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 NUDT12Q9BQG2 462 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 OSBPL5Q9H0X9 879 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 CDHR5Q9HBB8 845 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 SMYD2Q9NRG4 433 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 GTF3C4Q9UKN8 822 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 BTAF1O14981 1849 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 SBF2Q86WG5 1849 aa5.77□□□□□ -1.49
TRAPPC11-208ENST00000511955 TNS1Q9HBL0 1735 aaKnown RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 LOC102724428A0A0B4J2F2 783 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 PRAMEF22A3QJZ6 481 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 GALR2O43603 387 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 CTSHP09668 335 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 CCDC172P0C7W6 258 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 RAC2P15153 192 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 MZF1P28698 734 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 PIP4K2AP48426 406 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 SIK1P57059 783 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 INHBEP58166 350 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 NFKB2Q00653 900 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 MZT2AQ6P582 158 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 CCBE1Q6UXH8 406 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 CCDC129Q6ZRS4 1044 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 CATSPER4Q7RTX7 472 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 MILR1Q7Z6M3 343 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 TAX1BP1Q86VP1 789 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 MNS1Q8NEH6 495 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 PARD3BQ8TEW8 1205 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 VPS33BQ9H267 617 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 PDRG1Q9NUG6 133 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 NHSQ6T4R5 1651 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 PLSCR1O15162 318 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 AKR1B10O60218 316 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 IL33O95760 270 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 ATF7P17544 494 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 KRT20P35900 424 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 PIN1Q13526 163 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 DSG2Q14126 1118 aa5.76□□□□□ -1.49
TRAPPC11-208ENST00000511955 INF2Q27J81 1249 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms