RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 LARGE1O95461 756 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 HMGB1P09429 215 aaKnown RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 TOP1P11387 765 aaKnown RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 HMGCS2P54868 508 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 TTLL12Q14166 644 aaPredicted RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 APOA5Q6Q788 366 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 BLOC1S2Q6QNY1 142 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 BTNL9Q6UXG8 535 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 LBX2Q6XYB7 198 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 NBPF11Q86T75 865 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 STAG2Q8N3U4 1231 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 JMYQ8N9B5 988 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 REPS2Q8NFH8 660 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 CCDC102AQ96A19 550 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 MTMR8Q96EF0 704 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 MAP3K14Q99558 947 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 R3HDMLQ9H3Y0 253 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 CABP5Q9NP86 173 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 MAD2L2Q9UI95 211 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 TPCN1Q9ULQ1 816 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 STX8Q9UNK0 236 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF536O15090 1300 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 RBBP6Q7Z6E9 1792 aaKnown RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 MPHOSPH10O00566 681 aaKnown RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 PLA2G6O60733 806 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 CDC27P30260 824 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 MAP2K2P36507 400 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 RCAN1P53805 252 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 AK2P54819 239 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 KIF23Q02241 960 aaPredicted RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 NOGQ13253 232 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 CATSPERGQ6ZRH7 1159 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 Q6ZUG5 572 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 RALYLQ86SE5 291 aaKnown RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 IQCA1Q86XH1 822 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 PNMA1Q8ND90 353 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 LPAR1Q92633 364 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 BRF1Q92994 677 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 SHISA4Q96DD7 197 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 NUP88Q99567 741 aaPredicted RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 PICK1Q9NRD5 415 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 FBXO28Q9NVF7 368 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 ABT1Q9ULW3 272 aaKnown RBP5.81□□□□□ -1.48
LMNB1-208ENST00000504788 AGTPBP1Q9UPW5 1226 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 SLC45A1Q9Y2W3 748 aa5.81□□□□□ -1.48
LMNB1-208ENST00000504788 ZNFX1Q9P2E3 1918 aaKnown RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 CCL15-CCL14A0A0B4J2E2 113 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 IFIT3O14879 490 aaKnown RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 WDR46O15213 610 aaKnown RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 EIF5BO60841 1220 aaKnown RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 CNMDO75829 334 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 CTDNEP1O95476 244 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 PSMA5P28066 241 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 PDIA3P30101 505 aaKnown RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 GTF2A2P52657 109 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF543Q08ER8 600 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 TRDNQ13061 729 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 MKRN3Q13064 507 aaKnown RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 SNAPC2Q13487 334 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 GRM4Q14833 912 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 CCL15Q16663 113 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 ME3Q16798 604 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 TMEM67Q5HYA8 995 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 TTBK2Q6IQ55 1244 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 USP17L2Q6R6M4 530 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 ANKRD23Q86SG2 305 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 IFNL1Q8IU54 200 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF654Q8IZM8 581 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 SPICE1Q8N0Z3 855 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 MYL10Q9BUA6 226 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 CPVLQ9H3G5 476 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 RIOX1Q9H6W3 641 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 AS3MTQ9HBK9 375 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 TXNRD2Q9NNW7 524 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 ZCCHC17Q9NP64 241 aaKnown RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 TOMM22Q9NS69 142 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF214Q9UL59 606 aaPredicted RBP5.8□□□□□ -1.48
LMNB1-208ENST00000504788 CYP46A1Q9Y6A2 500 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 ZNF236Q9UL36 1845 aa5.8□□□□□ -1.48
LMNB1-208ENST00000504788 LRRC37A2A6NM11 1700 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 MKI67P46013 3256 aaKnown RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 MANSC4A6NHS7 340 aaPredicted RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 SPDYE16A6NNV3 312 aaPredicted RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 PEX10O60683 326 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 BCRP11274 1271 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 CETPP11597 493 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 RXRAP19793 462 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 MCCP23508 829 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 CTGFP29279 349 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 NEK4P51957 841 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 USP14P54578 494 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 INHBEP58166 350 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 APOBRQ0VD83 1088 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 MMRN1Q13201 1228 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 WTAPQ15007 396 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 RABEP1Q15276 862 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 ZYXQ15942 572 aaKnown RBP5.79□□□□□ -1.48
LMNB1-208ENST00000504788 CCDC178Q5BJE1 867 aa5.79□□□□□ -1.48
LMNB1-208ENST00000504788 FAM83BQ5T0W9 1011 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms