RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 DSG3P32926 999 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 MCM5P33992 734 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 SART3Q15020 963 aaKnown RBP18.27■□□□□ 0.52
CPNE1-228ENST00000498814 POTEEQ6S8J3 1075 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 ANKRD13CQ8N6S4 541 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 DCAF4Q8WV16 495 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 ERO1AQ96HE7 468 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 RBPJLQ9UBG7 517 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 SNX14Q9Y5W7 946 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 COL11A1P12107 1806 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-228ENST00000498814 ERICH2A1L162 156 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 IFIT3O14879 490 aaKnown RBP18.26■□□□□ 0.51
CPNE1-228ENST00000498814 SLC1A4P43007 532 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 LACTBP83111 547 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-228ENST00000498814 ADCK5Q3MIX3 580 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 IFIT1BQ5T764 474 aaKnown RBP18.26■□□□□ 0.51
CPNE1-228ENST00000498814 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 IGDCC4Q8TDY8 1250 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 FBXO28Q9NVF7 368 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 FEM1BQ9UK73 627 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 ADAMTS5Q9UNA0 930 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
CPNE1-228ENST00000498814 PRC1O43663 620 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 PLA2G6O60733 806 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 COL9A3Q14050 684 aaPredicted RBP18.25■□□□□ 0.51
CPNE1-228ENST00000498814 C8orf34Q49A92 452 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 MB21D1Q8N884 522 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 GPRC5AQ8NFJ5 357 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 TMEM87BQ96K49 555 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 SLF1Q9BQI6 1058 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 TXNRD2Q9NNW7 524 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 PPP1R9AQ9ULJ8 1098 aa18.25■□□□□ 0.51
CPNE1-228ENST00000498814 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 ZSWIM8A7E2V4 1837 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
CPNE1-228ENST00000498814 PDHBP11177 359 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 KIF22Q14807 665 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 WTAPQ15007 396 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 ARHGEF6Q15052 776 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 TMEM67Q5HYA8 995 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 PRPF38AQ8NAV1 312 aaKnown RBP18.24■□□□□ 0.51
CPNE1-228ENST00000498814 CD99L2Q8TCZ2 262 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 ATG4CQ96DT6 458 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 MTMR7Q9Y216 660 aa18.24■□□□□ 0.51
CPNE1-228ENST00000498814 DOCK3Q8IZD9 2030 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 TMEM232C9JQI7 657 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 CNMDO75829 334 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 SEC24BO95487 1268 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 STAT2P52630 851 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 ERVK-9P63128 1117 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 ERVK-24P63145 666 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 EXOSC10Q01780 885 aaKnown RBP18.23■□□□□ 0.51
CPNE1-228ENST00000498814 KCTD1Q719H9 257 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 DHX32Q7L7V1 743 aaKnown RBP18.23■□□□□ 0.51
CPNE1-228ENST00000498814 RASGRP2Q7LDG7 609 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 FAM160B2Q86V87 743 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 TMTC2Q8N394 836 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 CHURC1Q8WUH1 139 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 PAGR1Q9BTK6 254 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 BTBD7Q9P203 1132 aa18.23■□□□□ 0.51
CPNE1-228ENST00000498814 VWA5AO00534 786 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 SH2B2O14492 632 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-228ENST00000498814 PSMA5P28066 241 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 CAP1Q01518 475 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 CCDC96Q2M329 555 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 Q3C1V9 767 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 CHMP4CQ96CF2 233 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 JAKMIP1Q96N16 626 aaKnown RBP18.22■□□□□ 0.51
CPNE1-228ENST00000498814 LY9Q9HBG7 655 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
CPNE1-228ENST00000498814 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
CPNE1-228ENST00000498814 PEX10O60683 326 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 GNRH1P01148 92 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 FDX1P10109 184 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 CTGFP29279 349 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 LIFRP42702 1097 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 PSMC4P43686 418 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 GPATCH4Q5T3I0 446 aaKnown RBP18.21■□□□□ 0.51
CPNE1-228ENST00000498814 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-228ENST00000498814 BTNL9Q6UXG8 535 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 CTU1Q7Z7A3 348 aaKnown RBP18.21■□□□□ 0.51
CPNE1-228ENST00000498814 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 ARHGAP39Q9C0H5 1083 aa18.21■□□□□ 0.51
CPNE1-228ENST00000498814 GPHNQ9NQX3 736 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-228ENST00000498814 FCGRTP55899 365 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 ANAPC15P60006 121 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 CCNA1P78396 465 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 IKQ13123 557 aaPredicted RBP18.2■□□□□ 0.5
CPNE1-228ENST00000498814 BLOC1S2Q6QNY1 142 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 REPS2Q8NFH8 660 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 TRIM47Q96LD4 638 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 TM6SF1Q9BZW5 370 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 EFCC1Q9HA90 598 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 GPCPD1Q9NPB8 672 aa18.2■□□□□ 0.5
CPNE1-228ENST00000498814 FRMPD2Q68DX3 1309 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1545.9 ms