RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 GIMAP6Q6P9H5 292 aa27.86■■■□□ 2.05
COL27A1-208ENST00000494780 SAMD1Q6SPF0 538 aaPredicted RBP27.86■■■□□ 2.05
COL27A1-208ENST00000494780 ARRDC4Q8NCT1 418 aa27.86■■■□□ 2.05
COL27A1-208ENST00000494780 SEPT4O43236 478 aa27.85■■■□□ 2.05
COL27A1-208ENST00000494780 APPBP2Q92624 585 aa27.85■■■□□ 2.05
COL27A1-208ENST00000494780 GSG1L2A8MUP6 293 aa27.84■■■□□ 2.05
COL27A1-208ENST00000494780 RIOX2Q8IUF8 465 aa27.84■■■□□ 2.05
COL27A1-208ENST00000494780 MAML3Q96JK9 1138 aa27.84■■■□□ 2.05
COL27A1-208ENST00000494780 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.84■■■□□ 2.05
COL27A1-208ENST00000494780 FBXO28Q9NVF7 368 aa27.84■■■□□ 2.05
COL27A1-208ENST00000494780 PPP1R9AQ9ULJ8 1098 aa27.84■■■□□ 2.05
COL27A1-208ENST00000494780 OSBP2Q969R2 916 aa27.83■■■□□ 2.05
COL27A1-208ENST00000494780 VWA5AO00534 786 aa27.82■■■□□ 2.04
COL27A1-208ENST00000494780 RNF113AO15541 343 aaKnown RBP27.82■■■□□ 2.04
COL27A1-208ENST00000494780 ZFYP08048 801 aaPredicted RBP27.82■■■□□ 2.04
COL27A1-208ENST00000494780 COPB2P35606 906 aa27.82■■■□□ 2.04
COL27A1-208ENST00000494780 ATN1P54259 1190 aaPredicted RBP27.82■■■□□ 2.04
COL27A1-208ENST00000494780 FAM83BQ5T0W9 1011 aa27.82■■■□□ 2.04
COL27A1-208ENST00000494780 GJC2Q5T442 439 aaPredicted RBP27.82■■■□□ 2.04
COL27A1-208ENST00000494780 MMP19Q99542 508 aa27.82■■■□□ 2.04
COL27A1-208ENST00000494780 MKNK2Q9HBH9 465 aa27.82■■■□□ 2.04
COL27A1-208ENST00000494780 ROBO3Q96MS0 1386 aa27.82■■■□□ 2.04
COL27A1-208ENST00000494780 GREB1LQ9C091 1923 aaPredicted RBP27.81■■■□□ 2.04
COL27A1-208ENST00000494780 KBTBD13C9JR72 458 aa27.81■■■□□ 2.04
COL27A1-208ENST00000494780 RAD21O60216 631 aa27.81■■■□□ 2.04
COL27A1-208ENST00000494780 RASA1P20936 1047 aa27.81■■■□□ 2.04
COL27A1-208ENST00000494780 STAT3P40763 770 aa27.81■■■□□ 2.04
COL27A1-208ENST00000494780 MDM2Q00987 491 aaPredicted RBP27.81■■■□□ 2.04
COL27A1-208ENST00000494780 NYAP2Q9P242 653 aa27.81■■■□□ 2.04
COL27A1-208ENST00000494780 NRBP1Q9UHY1 535 aa27.81■■■□□ 2.04
COL27A1-208ENST00000494780 LAMA3Q16787 3333 aa27.8■■■□□ 2.04
COL27A1-208ENST00000494780 MINDY4BA8MYZ0 360 aa27.8■■■□□ 2.04
COL27A1-208ENST00000494780 GNAT2P19087 354 aa27.8■■■□□ 2.04
COL27A1-208ENST00000494780 KCTD2Q14681 263 aa27.8■■■□□ 2.04
COL27A1-208ENST00000494780 PRAMEF19Q5SWL8 479 aa27.8■■■□□ 2.04
COL27A1-208ENST00000494780 ZNF214Q9UL59 606 aaPredicted RBP27.8■■■□□ 2.04
COL27A1-208ENST00000494780 COL11A1P12107 1806 aaPredicted RBP27.8■■■□□ 2.04
COL27A1-208ENST00000494780 RTP1P59025 263 aa27.79■■■□□ 2.04
COL27A1-208ENST00000494780 LRRFIP1Q32MZ4 808 aaKnown RBP27.79■■■□□ 2.04
COL27A1-208ENST00000494780 ANO1Q5XXA6 986 aa27.79■■■□□ 2.04
COL27A1-208ENST00000494780 TSHZ3Q63HK5 1081 aa27.79■■■□□ 2.04
COL27A1-208ENST00000494780 REPS2Q8NFH8 660 aa27.79■■■□□ 2.04
COL27A1-208ENST00000494780 LBHD1Q9BQE6 289 aaPredicted RBP27.79■■■□□ 2.04
COL27A1-208ENST00000494780 DIS3Q9Y2L1 958 aaKnown RBP27.79■■■□□ 2.04
COL27A1-208ENST00000494780 GPAA1O43292 621 aa27.78■■■□□ 2.04
COL27A1-208ENST00000494780 ZNF287Q9HBT7 754 aa27.78■■■□□ 2.04
COL27A1-208ENST00000494780 PRKAG2Q9UGJ0 569 aa27.78■■■□□ 2.04
COL27A1-208ENST00000494780 ZNFX1Q9P2E3 1918 aaKnown RBP27.77■■■□□ 2.04
COL27A1-208ENST00000494780 ZNF792Q3KQV3 632 aa27.77■■■□□ 2.04
COL27A1-208ENST00000494780 SLC39A5Q6ZMH5 540 aa27.77■■■□□ 2.04
COL27A1-208ENST00000494780 STK11IPQ8N1F8 1099 aa27.77■■■□□ 2.04
COL27A1-208ENST00000494780 SLF1Q9BQI6 1058 aa27.77■■■□□ 2.04
COL27A1-208ENST00000494780 EPB41L4AQ9HCS5 686 aaPredicted RBP27.77■■■□□ 2.04
COL27A1-208ENST00000494780 TTC41PQ6P2S7 1318 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 F5H6K3 240 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 PGK2P07205 417 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 TDO2P48775 406 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 KLRC3Q07444 240 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 DEFB123Q8N688 67 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 TINF2Q9BSI4 451 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 ATP11BQ9Y2G3 1177 aa27.76■■■□□ 2.03
COL27A1-208ENST00000494780 IGKV6D-41A0A0C4DH26 115 aa27.75■■■□□ 2.03
COL27A1-208ENST00000494780 M0R2C6 588 aa27.75■■■□□ 2.03
COL27A1-208ENST00000494780 MYCNP04198 464 aaPredicted RBP27.75■■■□□ 2.03
COL27A1-208ENST00000494780 LRRC41Q15345 812 aa27.75■■■□□ 2.03
COL27A1-208ENST00000494780 NUP88Q99567 741 aaPredicted RBP27.75■■■□□ 2.03
COL27A1-208ENST00000494780 TEX13BQ9BXU2 312 aa27.75■■■□□ 2.03
COL27A1-208ENST00000494780 PATL2C9JE40 543 aaKnown RBP27.74■■■□□ 2.03
COL27A1-208ENST00000494780 NDUFB10O96000 172 aa27.74■■■□□ 2.03
COL27A1-208ENST00000494780 APPP05067 770 aa27.74■■■□□ 2.03
COL27A1-208ENST00000494780 SNX17Q15036 470 aa27.74■■■□□ 2.03
COL27A1-208ENST00000494780 FAM47AQ5JRC9 791 aa27.74■■■□□ 2.03
COL27A1-208ENST00000494780 ZNF444Q8N0Y2 327 aaPredicted RBP27.74■■■□□ 2.03
COL27A1-208ENST00000494780 CLIP2Q9UDT6 1046 aa27.74■■■□□ 2.03
COL27A1-208ENST00000494780 ERC2O15083 957 aa27.73■■■□□ 2.03
COL27A1-208ENST00000494780 RARBP10826 455 aa27.73■■■□□ 2.03
COL27A1-208ENST00000494780 IFNL3Q8IZI9 196 aa27.73■■■□□ 2.03
COL27A1-208ENST00000494780 PRPF38AQ8NAV1 312 aaKnown RBP27.73■■■□□ 2.03
COL27A1-208ENST00000494780 MKL1Q969V6 931 aa27.73■■■□□ 2.03
COL27A1-208ENST00000494780 SYNPO2Q9UMS6 1093 aa27.73■■■□□ 2.03
COL27A1-208ENST00000494780 ADCYAP1R1P41586 468 aa27.72■■■□□ 2.03
COL27A1-208ENST00000494780 C1orf53Q5VUE5 145 aa27.72■■■□□ 2.03
COL27A1-208ENST00000494780 Q7L0L9 218 aa27.72■■■□□ 2.03
COL27A1-208ENST00000494780 NACAP1Q9BZK3 213 aa27.72■■■□□ 2.03
COL27A1-208ENST00000494780 XPNPEP3Q9NQH7 507 aa27.72■■■□□ 2.03
COL27A1-208ENST00000494780 ATP2A1O14983 1001 aa27.71■■■□□ 2.03
COL27A1-208ENST00000494780 SNRNP48Q6IEG0 339 aaKnown RBP27.71■■■□□ 2.03
COL27A1-208ENST00000494780 MSL3Q8N5Y2 521 aaKnown RBP27.71■■■□□ 2.03
COL27A1-208ENST00000494780 SLC17A8Q8NDX2 589 aa27.71■■■□□ 2.03
COL27A1-208ENST00000494780 MTMR4Q9NYA4 1195 aa27.71■■■□□ 2.03
COL27A1-208ENST00000494780 PLXNA1Q9UIW2 1896 aa27.71■■■□□ 2.03
COL27A1-208ENST00000494780 PHF24Q9UPV7 400 aa27.71■■■□□ 2.03
COL27A1-208ENST00000494780 PRDM1O75626 825 aa27.7■■■□□ 2.02
COL27A1-208ENST00000494780 TRIM60Q495X7 471 aa27.7■■■□□ 2.02
COL27A1-208ENST00000494780 PI4K2BQ8TCG2 481 aa27.7■■■□□ 2.02
COL27A1-208ENST00000494780 CEP95Q96GE4 821 aa27.7■■■□□ 2.02
COL27A1-208ENST00000494780 CNPY2Q9Y2B0 182 aa27.7■■■□□ 2.02
COL27A1-208ENST00000494780 PCDHB15Q9Y5E8 787 aa27.7■■■□□ 2.02
COL27A1-208ENST00000494780 ZBED4O75132 1171 aa27.69■■■□□ 2.02
COL27A1-208ENST00000494780 TTLL1O95922 423 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms