RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ZMYM1Q5SVZ6 1142 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 FAM83BQ5T0W9 1011 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 MAP3K21Q5TCX8 1036 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 CHRDL2Q6WN34 429 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
MSH5-218ENST00000494646 GOPCQ9HD26 462 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 INCENPQ9NQS7 918 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 OGDHLQ9ULD0 1010 aa11.46□□□□□ -0.57
MSH5-218ENST00000494646 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 SALL3Q9BXA9 1300 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 F5H6K3 240 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 ADORA2AP29274 412 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 CYP2C19P33261 490 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 MNX1P50219 401 aaPredicted RBP11.45□□□□□ -0.58
MSH5-218ENST00000494646 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
MSH5-218ENST00000494646 PDE1AP54750 535 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 KLRC3Q07444 240 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 HDAC1Q13547 482 aaPredicted RBP11.45□□□□□ -0.58
MSH5-218ENST00000494646 TMEM132BQ14DG7 1078 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 MFSD14CQ5VZR4 134 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 LHX8Q68G74 356 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 EXOC6Q8TAG9 804 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 APBA2Q99767 749 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 NACAP1Q9BZK3 213 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 NAPBQ9H115 298 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 NR2E3Q9Y5X4 410 aa11.45□□□□□ -0.58
MSH5-218ENST00000494646 STRNO43815 780 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 COBLO75128 1261 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 IGHDP01880 384 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 CAPN2P17655 700 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 CTDSPL2Q05D32 466 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 ANKLE1Q8NAG6 615 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 NYAP2Q9P242 653 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 STAP2Q9UGK3 403 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 GREB1LQ9C091 1923 aaPredicted RBP11.44□□□□□ -0.58
MSH5-218ENST00000494646 PLXNA1Q9UIW2 1896 aa11.44□□□□□ -0.58
MSH5-218ENST00000494646 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 HOXC6P09630 235 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 TSPY3P0CV98 308 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 TSPY8P0CW00 308 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 STAT3P40763 770 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 TFAP4Q01664 338 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 PDE4BQ07343 736 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 PPARAQ07869 468 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 VPS53Q5VIR6 699 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 ANO1Q5XXA6 986 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 C7orf61Q8IZ16 206 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 SHCBP1Q8NEM2 672 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 TRPV1Q8NER1 839 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 RILPL2Q969X0 211 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 EVI5LQ96CN4 794 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 CEP95Q96GE4 821 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 RWDD1Q9H446 243 aaPredicted RBP11.43□□□□□ -0.58
MSH5-218ENST00000494646 MROH8Q9H579 483 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 ZNF287Q9HBT7 754 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 RBM27Q9P2N5 1060 aaKnown RBP11.43□□□□□ -0.58
MSH5-218ENST00000494646 PPP1R9AQ9ULJ8 1098 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 ADAMTS5Q9UNA0 930 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 RANBP2P49792 3224 aaKnown RBP11.43□□□□□ -0.58
MSH5-218ENST00000494646 TRIOBPQ9H2D6 2365 aa11.43□□□□□ -0.58
MSH5-218ENST00000494646 FRMPD3Q5JV73 1810 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 VWA5AO00534 786 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 NDUFB10O96000 172 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 PGK2P07205 417 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 SLC3A2P08195 630 aaKnown RBP11.42□□□□□ -0.58
MSH5-218ENST00000494646 FCER1AP12319 257 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 LRRC47Q8N1G4 583 aaKnown RBP11.42□□□□□ -0.58
MSH5-218ENST00000494646 NEDD1Q8NHV4 660 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 MKL1Q969V6 931 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 FAM227BQ96M60 508 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 MMP19Q99542 508 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 MTMR4Q9NYA4 1195 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
MSH5-218ENST00000494646 A0A0G2JMZ2 1700 aa11.42□□□□□ -0.58
MSH5-218ENST00000494646 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 FOXP2O15409 715 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 SLC25A27O95847 323 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 SLFN13Q68D06 897 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 RIOX2Q8IUF8 465 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 CPXCR1Q8N123 301 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 REPS2Q8NFH8 660 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 KIFC2Q96AC6 838 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 SLF1Q9BQI6 1058 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 HELLSQ9NRZ9 838 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 SLC5A4Q9NY91 659 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 DDX20Q9UHI6 824 aaKnown RBP11.41□□□□□ -0.58
MSH5-218ENST00000494646 ISY1Q9ULR0 285 aaKnown RBP11.41□□□□□ -0.58
MSH5-218ENST00000494646 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
MSH5-218ENST00000494646 TACC3Q9Y6A5 838 aa11.41□□□□□ -0.58
MSH5-218ENST00000494646 A0A0D9SFI3 127 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms