RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TMEM132BQ14DG7 1078 aa23.56■■□□□ 1.36
SREBF1-216ENST00000490796 FAM83BQ5T0W9 1011 aa23.56■■□□□ 1.36
SREBF1-216ENST00000490796 ZNF444Q8N0Y2 327 aaPredicted RBP23.56■■□□□ 1.36
SREBF1-216ENST00000490796 ARRDC4Q8NCT1 418 aa23.56■■□□□ 1.36
SREBF1-216ENST00000490796 NACAP1Q9BZK3 213 aa23.56■■□□□ 1.36
SREBF1-216ENST00000490796 FBXO28Q9NVF7 368 aa23.56■■□□□ 1.36
SREBF1-216ENST00000490796 TTC41PQ6P2S7 1318 aa23.56■■□□□ 1.36
SREBF1-216ENST00000490796 MYCNP04198 464 aaPredicted RBP23.55■■□□□ 1.36
SREBF1-216ENST00000490796 CYBAP13498 195 aa23.55■■□□□ 1.36
SREBF1-216ENST00000490796 RASA1P20936 1047 aa23.55■■□□□ 1.36
SREBF1-216ENST00000490796 COPB2P35606 906 aa23.55■■□□□ 1.36
SREBF1-216ENST00000490796 MAGEA10P43363 369 aaPredicted RBP23.55■■□□□ 1.36
SREBF1-216ENST00000490796 KCTD2Q14681 263 aa23.55■■□□□ 1.36
SREBF1-216ENST00000490796 LRRC26Q2I0M4 334 aa23.55■■□□□ 1.36
SREBF1-216ENST00000490796 MMP19Q99542 508 aa23.55■■□□□ 1.36
SREBF1-216ENST00000490796 PPP1R9AQ9ULJ8 1098 aa23.55■■□□□ 1.36
SREBF1-216ENST00000490796 CTDP1Q9Y5B0 961 aaPredicted RBP23.55■■□□□ 1.36
SREBF1-216ENST00000490796 DNM1LO00429 736 aa23.54■■□□□ 1.36
SREBF1-216ENST00000490796 STAT3P40763 770 aa23.54■■□□□ 1.36
SREBF1-216ENST00000490796 TRPV1Q8NER1 839 aa23.54■■□□□ 1.36
SREBF1-216ENST00000490796 FSD1Q9BTV5 496 aa23.54■■□□□ 1.36
SREBF1-216ENST00000490796 UBE2OQ9C0C9 1292 aaKnown RBP23.54■■□□□ 1.36
SREBF1-216ENST00000490796 RLFQ13129 1914 aa23.53■■□□□ 1.36
SREBF1-216ENST00000490796 KBTBD13C9JR72 458 aa23.53■■□□□ 1.36
SREBF1-216ENST00000490796 VWA5AO00534 786 aa23.53■■□□□ 1.36
SREBF1-216ENST00000490796 ATN1P54259 1190 aaPredicted RBP23.53■■□□□ 1.36
SREBF1-216ENST00000490796 RIOX2Q8IUF8 465 aa23.53■■□□□ 1.36
SREBF1-216ENST00000490796 NYAP2Q9P242 653 aa23.53■■□□□ 1.36
SREBF1-216ENST00000490796 PCDHB15Q9Y5E8 787 aa23.53■■□□□ 1.36
SREBF1-216ENST00000490796 A0A0G2JMZ2 1700 aa23.53■■□□□ 1.36
SREBF1-216ENST00000490796 PATL2C9JE40 543 aaKnown RBP23.52■■□□□ 1.36
SREBF1-216ENST00000490796 M0R2C6 588 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 SEPT4O43236 478 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 SLC3A2P08195 630 aaKnown RBP23.52■■□□□ 1.36
SREBF1-216ENST00000490796 GJC2Q5T442 439 aaPredicted RBP23.52■■□□□ 1.36
SREBF1-216ENST00000490796 ANO1Q5XXA6 986 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 MAML3Q96JK9 1138 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 SLF1Q9BQI6 1058 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.52■■□□□ 1.36
SREBF1-216ENST00000490796 CLIP2Q9UDT6 1046 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 PRKAG2Q9UGJ0 569 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 ADAMTS5Q9UNA0 930 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 ZNF236Q9UL36 1845 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 SZT2Q5T011 3432 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 ROBO3Q96MS0 1386 aa23.52■■□□□ 1.36
SREBF1-216ENST00000490796 F5H6K3 240 aa23.51■■□□□ 1.35
SREBF1-216ENST00000490796 KLRC3Q07444 240 aa23.51■■□□□ 1.35
SREBF1-216ENST00000490796 IFNL3Q8IZI9 196 aa23.51■■□□□ 1.35
SREBF1-216ENST00000490796 NUP88Q99567 741 aaPredicted RBP23.51■■□□□ 1.35
SREBF1-216ENST00000490796 LBHD1Q9BQE6 289 aaPredicted RBP23.51■■□□□ 1.35
SREBF1-216ENST00000490796 EPB41L4AQ9HCS5 686 aaPredicted RBP23.51■■□□□ 1.35
SREBF1-216ENST00000490796 PRDM1O75626 825 aa23.5■■□□□ 1.35
SREBF1-216ENST00000490796 IGHA2P01877 340 aa23.5■■□□□ 1.35
SREBF1-216ENST00000490796 PDE4BQ07343 736 aa23.5■■□□□ 1.35
SREBF1-216ENST00000490796 PRAMEF19Q5SWL8 479 aa23.5■■□□□ 1.35
SREBF1-216ENST00000490796 TDHQ8IZJ6 230 aa23.5■■□□□ 1.35
SREBF1-216ENST00000490796 NAPBQ9H115 298 aa23.5■■□□□ 1.35
SREBF1-216ENST00000490796 SOX1O00570 391 aaPredicted RBP23.49■■□□□ 1.35
SREBF1-216ENST00000490796 ZBED4O75132 1171 aa23.49■■□□□ 1.35
SREBF1-216ENST00000490796 NDUFB10O96000 172 aa23.49■■□□□ 1.35
SREBF1-216ENST00000490796 PGK2P07205 417 aa23.49■■□□□ 1.35
SREBF1-216ENST00000490796 MX1P20591 662 aa23.49■■□□□ 1.35
SREBF1-216ENST00000490796 SLC4A3P48751 1232 aa23.49■■□□□ 1.35
SREBF1-216ENST00000490796 LRCH3Q96II8 777 aa23.49■■□□□ 1.35
SREBF1-216ENST00000490796 TEX13BQ9BXU2 312 aa23.49■■□□□ 1.35
SREBF1-216ENST00000490796 ISY1Q9ULR0 285 aaKnown RBP23.49■■□□□ 1.35
SREBF1-216ENST00000490796 TSPY3P0CV98 308 aa23.48■■□□□ 1.35
SREBF1-216ENST00000490796 TSPY8P0CW00 308 aa23.48■■□□□ 1.35
SREBF1-216ENST00000490796 RRP1P56182 461 aaKnown RBP23.48■■□□□ 1.35
SREBF1-216ENST00000490796 MDM2Q00987 491 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-216ENST00000490796 SNRNP48Q6IEG0 339 aaKnown RBP23.48■■□□□ 1.35
SREBF1-216ENST00000490796 PRPF38AQ8NAV1 312 aaKnown RBP23.48■■□□□ 1.35
SREBF1-216ENST00000490796 PI4K2BQ8TCG2 481 aa23.48■■□□□ 1.35
SREBF1-216ENST00000490796 NRBP1Q9UHY1 535 aa23.48■■□□□ 1.35
SREBF1-216ENST00000490796 ZNF214Q9UL59 606 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-216ENST00000490796 ATP11BQ9Y2G3 1177 aa23.48■■□□□ 1.35
SREBF1-216ENST00000490796 FRMPD3Q5JV73 1810 aa23.47■■□□□ 1.35
SREBF1-216ENST00000490796 TTLL1O95922 423 aa23.47■■□□□ 1.35
SREBF1-216ENST00000490796 RTP1P59025 263 aa23.47■■□□□ 1.35
SREBF1-216ENST00000490796 OTUD7AQ8TE49 926 aaPredicted RBP23.47■■□□□ 1.35
SREBF1-216ENST00000490796 KIFC2Q96AC6 838 aa23.47■■□□□ 1.35
SREBF1-216ENST00000490796 DDX11Q96FC9 970 aa23.47■■□□□ 1.35
SREBF1-216ENST00000490796 SEC62Q99442 399 aaKnown RBP23.47■■□□□ 1.35
SREBF1-216ENST00000490796 TINF2Q9BSI4 451 aa23.47■■□□□ 1.35
SREBF1-216ENST00000490796 DIS3Q9Y2L1 958 aaKnown RBP23.47■■□□□ 1.35
SREBF1-216ENST00000490796 RARBP10826 455 aa23.46■■□□□ 1.35
SREBF1-216ENST00000490796 ANKRD45Q5TZF3 282 aa23.46■■□□□ 1.35
SREBF1-216ENST00000490796 CPXCR1Q8N123 301 aa23.46■■□□□ 1.35
SREBF1-216ENST00000490796 REPS2Q8NFH8 660 aa23.46■■□□□ 1.35
SREBF1-216ENST00000490796 CEP95Q96GE4 821 aa23.46■■□□□ 1.35
SREBF1-216ENST00000490796 MTMR4Q9NYA4 1195 aa23.46■■□□□ 1.35
SREBF1-216ENST00000490796 CNPY2Q9Y2B0 182 aa23.46■■□□□ 1.35
SREBF1-216ENST00000490796 COL11A1P12107 1806 aaPredicted RBP23.45■■□□□ 1.34
SREBF1-216ENST00000490796 PARP14Q460N5 1801 aa23.45■■□□□ 1.34
SREBF1-216ENST00000490796 LAMA3Q16787 3333 aa23.45■■□□□ 1.34
SREBF1-216ENST00000490796 ZNF792Q3KQV3 632 aa23.45■■□□□ 1.34
SREBF1-216ENST00000490796 ZMYM1Q5SVZ6 1142 aa23.45■■□□□ 1.34
SREBF1-216ENST00000490796 LRRC47Q8N1G4 583 aaKnown RBP23.45■■□□□ 1.34
SREBF1-216ENST00000490796 FEM1BQ9UK73 627 aa23.45■■□□□ 1.34
SREBF1-216ENST00000490796 ZNFX1Q9P2E3 1918 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms