RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CHST3Q7LGC8 479 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 FAM177A1Q8N128 213 aaPredicted RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 LCORLQ8N3X6 602 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 WDR66Q8TBY9 1149 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 PGBD1Q96JS3 809 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 UBAC1Q9BSL1 405 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 RAI14Q9P0K7 980 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 TSR3Q9UJK0 312 aaKnown RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 ZKSCAN5Q9Y2L8 839 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 FAM205AQ6ZU69 1335 aa9.78□□□□□ -0.84
VTI1A-207ENST00000489357 COL1A1P02452 1464 aaPredicted RBP9.78□□□□□ -0.84
VTI1A-207ENST00000489357 GOLGA8AA7E2F4 631 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 GOLGA6L6A8MZA4 724 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 ORC4O43929 436 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 PPP6R2O75170 966 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 RAD17O75943 681 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 XBP1P17861 261 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 LIG1P18858 919 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 RPS12P25398 132 aaKnown RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 MMP14P50281 582 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 FKBP1AP62942 108 aaKnown RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 GSTO1P78417 241 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 KIF23Q02241 960 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 SSRP1Q08945 709 aaKnown RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 WTAPQ15007 396 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 NTRK3Q16288 839 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 CCDC178Q5BJE1 867 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 DACT2Q5SW24 774 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 STRIP1Q5VSL9 837 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 FAM173BQ6P4H8 233 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 IQCA1Q86XH1 822 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 ELOA2Q8IYF1 753 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 AGBL3Q8NEM8 1001 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 MRPS27Q92552 414 aaKnown RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 TIGD1Q96MW7 591 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 USP28Q96RU2 1077 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 ALG1Q9BT22 464 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 RNF26Q9BY78 433 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 TAF1DQ9H5J8 278 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 RRAGDQ9NQL2 400 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 RBM28Q9NW13 759 aaKnown RBP9.77□□□□□ -0.85
VTI1A-207ENST00000489357 GPRC5DQ9NZD1 345 aa9.77□□□□□ -0.85
VTI1A-207ENST00000489357 FAM237AA0A1B0GTK4 181 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 USP17L3A6NCW0 530 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 USP17L4A6NCW7 530 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 NR1I2O75469 434 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 DDAH1O94760 285 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 DEXIO95424 95 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 HSPA6P17066 643 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 CMA1P23946 247 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 GYG1P46976 350 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 ME1P48163 572 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 TERF1P54274 439 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 ZNF280AP59817 542 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-207ENST00000489357 DHX8Q14562 1220 aaKnown RBP9.76□□□□□ -0.85
VTI1A-207ENST00000489357 SAFBQ15424 915 aaKnown RBP eCLIP9.76□□□□□ -0.85
VTI1A-207ENST00000489357 STX1AQ16623 288 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 RTN1Q16799 776 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 USP17L1Q7RTZ2 530 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 RNF214Q8ND24 703 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 ENGASEQ8NFI3 743 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 NSUN4Q96CB9 384 aaKnown RBP9.76□□□□□ -0.85
VTI1A-207ENST00000489357 MAP3K14Q99558 947 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 NAT10Q9H0A0 1025 aaKnown RBP9.76□□□□□ -0.85
VTI1A-207ENST00000489357 FOXP1Q9H334 677 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-207ENST00000489357 ABCF2Q9UG63 623 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 PGAP2Q9UHJ9 254 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 ECM29Q5VYK3 1845 aa9.76□□□□□ -0.85
VTI1A-207ENST00000489357 IQCA1LA6NCM1 817 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 SPTLC2O15270 562 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 LDHCP07864 332 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 EPS15P42566 896 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 GMPSP49915 693 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-207ENST00000489357 SLC39A14Q15043 492 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 STK38Q15208 465 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 SEC23AQ15436 765 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 SF3A1Q15459 793 aaKnown RBP9.75□□□□□ -0.85
VTI1A-207ENST00000489357 RILPL1Q5EBL4 403 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 ANO1Q5XXA6 986 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 KRT40Q6A162 431 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-207ENST00000489357 ZNF804AQ7Z570 1209 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 MICU3Q86XE3 530 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 CCAR1Q8IX12 1150 aaKnown RBP9.75□□□□□ -0.85
VTI1A-207ENST00000489357 CERS5Q8N5B7 392 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-207ENST00000489357 BEGAINQ9BUH8 593 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 FAM117AQ9C073 453 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 HACL1Q9UJ83 578 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 MRVI1Q9Y6F6 885 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 ROBO3Q96MS0 1386 aa9.75□□□□□ -0.85
VTI1A-207ENST00000489357 BAG3O95817 575 aa9.74□□□□□ -0.85
VTI1A-207ENST00000489357 BMP15O95972 392 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms