RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 GPRC5AQ8NFJ5 357 aa18.74■□□□□ 0.59
UPF3A-208ENST00000484246 ANKS1AQ92625 1134 aa18.74■□□□□ 0.59
UPF3A-208ENST00000484246 B4E1Z4 1266 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 KDM4AO75164 1064 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 FLOT1O75955 427 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 FAM83BQ5T0W9 1011 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 DGKHQ86XP1 1220 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 ANO2Q9NQ90 1003 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 SRRDQ9UH36 339 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 PPP1R9AQ9ULJ8 1098 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 PTPN22Q9Y2R2 807 aa18.73■□□□□ 0.59
UPF3A-208ENST00000484246 PLA2G6O60733 806 aa18.72■□□□□ 0.59
UPF3A-208ENST00000484246 HOXD10P28358 340 aa18.72■□□□□ 0.59
UPF3A-208ENST00000484246 NECTIN1Q15223 517 aa18.72■□□□□ 0.59
UPF3A-208ENST00000484246 SLFN13Q68D06 897 aa18.72■□□□□ 0.59
UPF3A-208ENST00000484246 EPB41L2O43491 1005 aaKnown RBP18.71■□□□□ 0.59
UPF3A-208ENST00000484246 MAPK4P31152 587 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 CCNA1P78396 465 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 TRDNQ13061 729 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 DCAF4Q8WV16 495 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 ABHD8Q96I13 439 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 SLF1Q9BQI6 1058 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 TMEM47Q9BQJ4 181 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 FBXO28Q9NVF7 368 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 BTBD7Q9P203 1132 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 ZSWIM5Q9P217 1185 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 TAF6LQ9Y6J9 622 aa18.71■□□□□ 0.59
UPF3A-208ENST00000484246 E7EWF7 191 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 TNPO2O14787 897 aaKnown RBP18.7■□□□□ 0.58
UPF3A-208ENST00000484246 FMNL1O95466 1100 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-208ENST00000484246 SNHG28P0DPA3 235 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 BMP3P12645 472 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 STOX1Q6ZVD7 989 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 SHCBP1Q8NEM2 672 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 REPS2Q8NFH8 660 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 ATG4CQ96DT6 458 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 ZSCAN10Q96SZ4 725 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-208ENST00000484246 NUP88Q99567 741 aaPredicted RBP18.7■□□□□ 0.58
UPF3A-208ENST00000484246 PAGR1Q9BTK6 254 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 FEM1BQ9UK73 627 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 RLFQ13129 1914 aa18.7■□□□□ 0.58
UPF3A-208ENST00000484246 SLC27A2O14975 620 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 SLC1A4P43007 532 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 IRF5Q13568 498 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 Q3C1V9 767 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 CREB3L3Q68CJ9 461 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 FAM160B2Q86V87 743 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 ENAHQ8N8S7 591 aaPredicted RBP18.69■□□□□ 0.58
UPF3A-208ENST00000484246 PRPF38AQ8NAV1 312 aaKnown RBP18.69■□□□□ 0.58
UPF3A-208ENST00000484246 NCOA7Q8NI08 942 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 SOCS4Q8WXH5 440 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 ARMC5Q96C12 935 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 MTA3Q9BTC8 594 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 TNKSO95271 1327 aa18.69■□□□□ 0.58
UPF3A-208ENST00000484246 VWA5AO00534 786 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 ATP2A1O14983 1001 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 FDX1P10109 184 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 PRKCZQ05513 592 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 SEC23AQ15436 765 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 TSGA10IPQ3SY00 556 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 RNF20Q5VTR2 975 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 RALYLQ86SE5 291 aaKnown RBP18.68■□□□□ 0.58
UPF3A-208ENST00000484246 MB21D2Q8IYB1 491 aaPredicted RBP18.68■□□□□ 0.58
UPF3A-208ENST00000484246 COA7Q96BR5 231 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 UBAC1Q9BSL1 405 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 SPATC1LQ9H0A9 340 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 PORCNQ9H237 461 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
UPF3A-208ENST00000484246 RAD21O60216 631 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 PEX10O60683 326 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 REC8O95072 547 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 PDHBP11177 359 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 COPB2P35606 906 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 STAT2P52630 851 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 BTNL9Q6UXG8 535 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 CYB5R4Q7L1T6 521 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 KCNB2Q92953 911 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 GJD2Q9UKL4 321 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 ZNF214Q9UL59 606 aaPredicted RBP18.67■□□□□ 0.58
UPF3A-208ENST00000484246 ZSWIM8A7E2V4 1837 aa18.67■□□□□ 0.58
UPF3A-208ENST00000484246 MCCP23508 829 aa18.66■□□□□ 0.58
UPF3A-208ENST00000484246 OAZ1P54368 228 aa18.66■□□□□ 0.58
UPF3A-208ENST00000484246 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
UPF3A-208ENST00000484246 GPR142Q7Z601 462 aa18.66■□□□□ 0.58
UPF3A-208ENST00000484246 CHURC1Q8WUH1 139 aa18.66■□□□□ 0.58
UPF3A-208ENST00000484246 ZKSCAN3Q9BRR0 538 aa18.66■□□□□ 0.58
UPF3A-208ENST00000484246 MOV10L1Q9BXT6 1211 aaKnown RBP18.66■□□□□ 0.58
UPF3A-208ENST00000484246 SLC38A10Q9HBR0 1119 aa18.66■□□□□ 0.58
UPF3A-208ENST00000484246 PARP14Q460N5 1801 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 SLC25A27O95847 323 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 FLT3LGP49771 235 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 MORN1Q5T089 497 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.65■□□□□ 0.58
UPF3A-208ENST00000484246 PLEKHH3Q7Z736 793 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 RIOX2Q8IUF8 465 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 SLAIN1Q8ND83 568 aa18.65■□□□□ 0.58
UPF3A-208ENST00000484246 PNMA1Q8ND90 353 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms