RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 GPCPD1Q9NPB8 672 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 CPA4Q9UI42 421 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 BRPF3Q9ULD4 1205 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 ADGRA2Q96PE1 1338 aa18.63■□□□□ 0.57
COPS3-207ENST00000477299 WDR46O15213 610 aaKnown RBP18.62■□□□□ 0.57
COPS3-207ENST00000477299 CA12O43570 354 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 ECM2O94769 699 aaPredicted RBP18.62■□□□□ 0.57
COPS3-207ENST00000477299 HSPA1AP0DMV8 641 aaKnown RBP18.62■□□□□ 0.57
COPS3-207ENST00000477299 HSPA1BP0DMV9 641 aaKnown RBP18.62■□□□□ 0.57
COPS3-207ENST00000477299 PDHBP11177 359 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 BMP3P12645 472 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 CCDC178Q5BJE1 867 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 OTUD7BQ6GQQ9 843 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 Q6ZUG5 572 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 RUFY3Q7L099 469 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 LPAR1Q92633 364 aa18.62■□□□□ 0.57
COPS3-207ENST00000477299 TMEM232C9JQI7 657 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 RXRAP19793 462 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 SLC1A4P43007 532 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 NT5C2P49902 561 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 SNAP25P60880 206 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 CAP1Q01518 475 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 STAG2Q8N3U4 1231 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 ATG4CQ96DT6 458 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 IL17RAQ96F46 866 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 TMEM87BQ96K49 555 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 TM6SF1Q9BZW5 370 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 TXNRD2Q9NNW7 524 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
COPS3-207ENST00000477299 SLC45A1Q9Y2W3 748 aa18.61■□□□□ 0.57
COPS3-207ENST00000477299 ERICH2A1L162 156 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 SPDYE16A6NNV3 312 aaPredicted RBP18.6■□□□□ 0.57
COPS3-207ENST00000477299 FLOT1O75955 427 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 SNHG28P0DPA3 235 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 OSBPP22059 807 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 PSMA5P28066 241 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 DSG3P32926 999 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 SLC16A2P36021 539 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 ANAPC15P60006 121 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 HERVK_113P62684 666 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
COPS3-207ENST00000477299 APOBRQ0VD83 1088 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 TROAPQ12815 778 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 TOB2Q14106 344 aaPredicted RBP18.6■□□□□ 0.57
COPS3-207ENST00000477299 CCDC96Q2M329 555 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 PPP4R3BQ5MIZ7 849 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 GMCL1Q96IK5 515 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 ZFYVE28Q9HCC9 887 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 SYNPO2Q9UMS6 1093 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 MYH6P13533 1939 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 MGAMO43451 1857 aa18.6■□□□□ 0.57
COPS3-207ENST00000477299 WDR19Q8NEZ3 1342 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 TLR2O60603 784 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 CNMDO75829 334 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 ALDH1A1P00352 501 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 HMGB1P09429 215 aaKnown RBP18.59■□□□□ 0.57
COPS3-207ENST00000477299 RBM25P49756 843 aaKnown RBP18.59■□□□□ 0.57
COPS3-207ENST00000477299 COG2Q14746 738 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
COPS3-207ENST00000477299 SLC35G1Q2M3R5 365 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 Q3C1V9 767 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 C17orf99Q6UX52 265 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 NFXL1Q6ZNB6 911 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 CCDC144CPQ8IYA2 1237 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 DCAF4Q8WV16 495 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 BRF1Q92994 677 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 BEGAINQ9BUH8 593 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 UBA5Q9GZZ9 404 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 ZCCHC17Q9NP64 241 aaKnown RBP18.59■□□□□ 0.57
COPS3-207ENST00000477299 BTBD7Q9P203 1132 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 CYP46A1Q9Y6A2 500 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 A0A0G2JMZ2 1700 aa18.59■□□□□ 0.57
COPS3-207ENST00000477299 LIFRP42702 1097 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 ZNF543Q08ER8 600 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 PABPC4Q13310 644 aaKnown RBP eCLIP18.58■□□□□ 0.56
COPS3-207ENST00000477299 ANKRD13CQ8N6S4 541 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 NUP133Q8WUM0 1156 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 KIFC2Q96AC6 838 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 PARK7Q99497 189 aaKnown RBP18.58■□□□□ 0.56
COPS3-207ENST00000477299 MTA3Q9BTC8 594 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 PAGR1Q9BTK6 254 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 MAD2L2Q9UI95 211 aa18.58■□□□□ 0.56
COPS3-207ENST00000477299 CCDC69A6NI79 296 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 EIF5BO60841 1220 aaKnown RBP18.57■□□□□ 0.56
COPS3-207ENST00000477299 HSPA8P11142 646 aaKnown RBP18.57■□□□□ 0.56
COPS3-207ENST00000477299 BCRP11274 1271 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 TAL1P17542 331 aaPredicted RBP18.57■□□□□ 0.56
COPS3-207ENST00000477299 CTGFP29279 349 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 NBPF11Q86T75 865 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 SGMS1Q86VZ5 419 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 SMCR8Q8TEV9 937 aaPredicted RBP18.57■□□□□ 0.56
COPS3-207ENST00000477299 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 CFHR5Q9BXR6 569 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 PDRG1Q9NUG6 133 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 SAGE1Q9NXZ1 904 aa18.57■□□□□ 0.56
COPS3-207ENST00000477299 PPP1R9AQ9ULJ8 1098 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms