RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HDAC8Q9BY41 377 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 SLC6A17Q9H1V8 727 aa8.3□□□□□ -1.08
CD46-213ENST00000471987 C1QTNF9P0C862 333 aa8.29□□□□□ -1.08
CD46-213ENST00000471987 ZNF16P17020 682 aaPredicted RBP8.29□□□□□ -1.08
CD46-213ENST00000471987 POLR2BP30876 1174 aaKnown RBP8.29□□□□□ -1.08
CD46-213ENST00000471987 CLCQ05315 142 aa8.29□□□□□ -1.08
CD46-213ENST00000471987 NBPF9Q3BBW0 867 aa8.29□□□□□ -1.08
CD46-213ENST00000471987 IRF2BP1Q8IU81 584 aa8.29□□□□□ -1.08
CD46-213ENST00000471987 ZSCAN18Q8TBC5 510 aaPredicted RBP8.29□□□□□ -1.08
CD46-213ENST00000471987 LINC01599Q8WXQ3 324 aa8.29□□□□□ -1.08
CD46-213ENST00000471987 NKD1Q969G9 470 aa8.29□□□□□ -1.08
CD46-213ENST00000471987 ZNF281Q9Y2X9 895 aa8.29□□□□□ -1.08
CD46-213ENST00000471987 CLEC3AO75596 197 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 KRT1P04264 644 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 TIGD5Q53EQ6 642 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 TMCO4Q5TGY1 634 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 SPOCD1Q6ZMY3 1216 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 KIAA0825Q8IV33 1275 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 SLITRK4Q8IW52 837 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 USHBP1Q8N6Y0 703 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 KCNK12Q9HB15 430 aa8.28□□□□□ -1.08
CD46-213ENST00000471987 SSU72P8A0A1W2PR75 194 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 GLDCP23378 1020 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 RPL10P27635 214 aaKnown RBP8.27□□□□□ -1.09
CD46-213ENST00000471987 CFPP27918 469 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 PCBP3P57721 371 aaKnown RBP8.27□□□□□ -1.09
CD46-213ENST00000471987 TMC3Q7Z5M5 1100 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 TCTN2Q96GX1 697 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 SPON2Q9BUD6 331 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 EBF1Q9UH73 591 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 GPR160Q9UJ42 338 aa8.27□□□□□ -1.09
CD46-213ENST00000471987 YBX2Q9Y2T7 364 aaKnown RBP8.27□□□□□ -1.09
CD46-213ENST00000471987 ZBTB7CA1YPR0 619 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 MEIS3P2A8K0S8 358 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 MED14OSP0DP75 135 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 NME1P15531 152 aaKnown RBP8.26□□□□□ -1.09
CD46-213ENST00000471987 ZNF76P36508 570 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 FBLN7Q53RD9 439 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 WAPLQ7Z5K2 1190 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 LRRC56Q8IYG6 542 aaPredicted RBP8.26□□□□□ -1.09
CD46-213ENST00000471987 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 KCNN1Q92952 543 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 INTS4Q96HW7 963 aaKnown RBP8.26□□□□□ -1.09
CD46-213ENST00000471987 G6PC3Q9BUM1 346 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 FOXP3Q9BZS1 431 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 TCFL5Q9UL49 500 aa8.26□□□□□ -1.09
CD46-213ENST00000471987 TCAF2A6NFQ2 919 aa8.25□□□□□ -1.09
CD46-213ENST00000471987 ETV2O00321 342 aaPredicted RBP8.25□□□□□ -1.09
CD46-213ENST00000471987 TNFRSF10CO14798 259 aa8.25□□□□□ -1.09
CD46-213ENST00000471987 SIGLEC6O43699 453 aa8.25□□□□□ -1.09
CD46-213ENST00000471987 SNW1Q13573 536 aaKnown RBP8.25□□□□□ -1.09
CD46-213ENST00000471987 LDLRAD1Q5T700 205 aa8.25□□□□□ -1.09
CD46-213ENST00000471987 ATG14Q6ZNE5 492 aa8.25□□□□□ -1.09
CD46-213ENST00000471987 EAF1Q96JC9 268 aaPredicted RBP8.25□□□□□ -1.09
CD46-213ENST00000471987 KRTAP4-11Q9BYQ6 195 aa8.25□□□□□ -1.09
CD46-213ENST00000471987 ANTXR1Q9H6X2 564 aa8.25□□□□□ -1.09
CD46-213ENST00000471987 PSPNO60542 156 aa8.24□□□□□ -1.09
CD46-213ENST00000471987 PRAMEF1O95521 474 aa8.24□□□□□ -1.09
CD46-213ENST00000471987 C1QL4Q86Z23 238 aa8.24□□□□□ -1.09
CD46-213ENST00000471987 ZNF512BQ96KM6 892 aaPredicted RBP8.24□□□□□ -1.09
CD46-213ENST00000471987 PRDM14Q9GZV8 571 aa8.24□□□□□ -1.09
CD46-213ENST00000471987 MKRN2Q9H000 416 aaKnown RBP8.24□□□□□ -1.09
CD46-213ENST00000471987 CD320Q9NPF0 282 aa8.24□□□□□ -1.09
CD46-213ENST00000471987 NPIPB6E9PJ23 425 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 SYPP08247 313 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 PDE6BP35913 854 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 KIR2DL1P43626 348 aaPredicted RBP8.23□□□□□ -1.09
CD46-213ENST00000471987 KIR2DL2P43627 348 aaPredicted RBP8.23□□□□□ -1.09
CD46-213ENST00000471987 KCNA10Q16322 511 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 USP48Q86UV5 1035 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 MAP6Q96JE9 813 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 SLC6A18Q96N87 628 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 BACH2Q9BYV9 841 aa8.23□□□□□ -1.09
CD46-213ENST00000471987 METTL5Q9NRN9 209 aaKnown RBP8.23□□□□□ -1.09
CD46-213ENST00000471987 TMEM82A0PJX8 343 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 PEX10O60683 326 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 USP2O75604 605 aaPredicted RBP8.22□□□□□ -1.09
CD46-213ENST00000471987 IMPDH2P12268 514 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 SLC14A2Q15849 920 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 ZNF605Q86T29 641 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 SIAH1Q8IUQ4 282 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 TMEM192Q8IY95 271 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 SHISA4Q96DD7 197 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 DHRS1Q96LJ7 313 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 CHST7Q9NS84 486 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 SMG5Q9UPR3 1016 aaKnown RBP8.22□□□□□ -1.09
CD46-213ENST00000471987 PCDHB12Q9Y5F1 795 aa8.22□□□□□ -1.09
CD46-213ENST00000471987 NOTOA8MTQ0 251 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 FKTNO75072 461 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 SEMA7AO75326 666 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 ZSCAN22P10073 491 aaPredicted RBP8.21□□□□□ -1.1
CD46-213ENST00000471987 ENDOUP21128 410 aaKnown RBP8.21□□□□□ -1.1
CD46-213ENST00000471987 BBS9Q3SYG4 887 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 INTS3Q68E01 1043 aaKnown RBP8.21□□□□□ -1.1
CD46-213ENST00000471987 NLRX1Q86UT6 975 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 SLC9A7Q96T83 725 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
CD46-213ENST00000471987 ZNF552Q9H707 407 aaPredicted RBP8.21□□□□□ -1.1
CD46-213ENST00000471987 FBXL21Q9UKT6 434 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms