RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 KIAA1522Q9P206 1035 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-205ENST00000469043 SSU72P8A0A1W2PR75 194 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 OR14I1A6ND48 311 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 PSPNO60542 156 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 RPL10P27635 214 aaKnown RBP6.82□□□□□ -1.32
SCFD1-205ENST00000469043 GBP2P32456 591 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-205ENST00000469043 BUD31P41223 144 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-205ENST00000469043 PWP1Q13610 501 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 RNF111Q6ZNA4 994 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 TMEM151BQ8IW70 566 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 RELTQ969Z4 430 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 ZMYM5Q9UJ78 669 aa6.82□□□□□ -1.32
SCFD1-205ENST00000469043 SHISA3A0PJX4 238 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-205ENST00000469043 GRIN3BO60391 1043 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 HTR3BO95264 441 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 SLC14A2Q15849 920 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 TMC4Q7Z404 712 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 SIRT2Q8IXJ6 389 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 TMEM74Q96NL1 305 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 KIF2CQ99661 725 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 RSRP1Q9BUV0 290 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 EBF1Q9UH73 591 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 KCTD3Q9Y597 815 aa6.81□□□□□ -1.32
SCFD1-205ENST00000469043 F6X3S4 739 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 CTSHP09668 335 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 RNF4P78317 190 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 NMIQ13287 307 aaPredicted RBP6.8□□□□□ -1.32
SCFD1-205ENST00000469043 USHBP1Q8N6Y0 703 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 SHISA4Q96DD7 197 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 SGPP1Q9BX95 441 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 GCM1Q9NP62 436 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 ZNF281Q9Y2X9 895 aa6.8□□□□□ -1.32
SCFD1-205ENST00000469043 CANXP27824 592 aaKnown RBP6.79□□□□□ -1.32
SCFD1-205ENST00000469043 ITGAEP38570 1179 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 KIR2DL1P43626 348 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-205ENST00000469043 KIR2DL2P43627 348 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-205ENST00000469043 MPP2Q14168 576 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 SNAP47Q5SQN1 464 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 ADGRF1Q5T601 910 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 WAPLQ7Z5K2 1190 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 DAGLBQ8NCG7 672 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 SYTL5Q8TDW5 730 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-205ENST00000469043 VWCEQ96DN2 955 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 CRTAC1Q9NQ79 661 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 SIRT5Q9NXA8 310 aa6.79□□□□□ -1.32
SCFD1-205ENST00000469043 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-205ENST00000469043 HRKO00198 91 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 RGS13O14921 159 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 SORBS3O60504 671 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 ERCC3P19447 782 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 GALK1P51570 392 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 PCBP3P57721 371 aaKnown RBP6.78□□□□□ -1.32
SCFD1-205ENST00000469043 SRSF3P84103 164 aaKnown RBP6.78□□□□□ -1.32
SCFD1-205ENST00000469043 NLRX1Q86UT6 975 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 ZNF655Q8N720 491 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-205ENST00000469043 GOLM1Q8NBJ4 401 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 CRELD1Q96HD1 420 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 RHOVQ96L33 236 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 G6PC3Q9BUM1 346 aa6.78□□□□□ -1.32
SCFD1-205ENST00000469043 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.78□□□□□ -1.32
SCFD1-205ENST00000469043 MINDY4BA8MYZ0 360 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 NRDCO43847 1150 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 FAM160A1Q05DH4 1040 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 REC114Q7Z4M0 266 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 MARCH10Q8NA82 808 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-205ENST00000469043 SIGLEC10Q96LC7 697 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 DRC1Q96MC2 740 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 FAM161BQ96MY7 647 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 HDAC8Q9BY41 377 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 MRS2Q9HD23 443 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 IRAK3Q9Y616 596 aa6.77□□□□□ -1.33
SCFD1-205ENST00000469043 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-205ENST00000469043 RAG1P15918 1043 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 TCF3P15923 654 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 OLFML2BQ68BL8 750 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 CEP128Q6ZU80 1094 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 TCTN2Q96GX1 697 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 MAP6Q96JE9 813 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 KCNC2Q96PR1 638 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 POLR3GLQ9BT43 218 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 FOXP3Q9BZS1 431 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 TCFL5Q9UL49 500 aa6.76□□□□□ -1.33
SCFD1-205ENST00000469043 ROBO2Q9HCK4 1378 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 SLC22A31A6NKX4 558 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 NOTOA8MTQ0 251 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 ABLIM1O14639 778 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 DNAJA2O60884 412 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 SASH1O94885 1247 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 PNLIPP16233 465 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 ZNF16P17020 682 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-205ENST00000469043 RAD51AP2Q09MP3 1159 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 SSPNQ14714 243 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 CWF19L2Q2TBE0 894 aaKnown RBP6.75□□□□□ -1.33
SCFD1-205ENST00000469043 ARSHQ5FYA8 562 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 DNAJC14Q6Y2X3 702 aaPredicted RBP6.75□□□□□ -1.33
SCFD1-205ENST00000469043 FAM196AQ6ZSG2 479 aa6.75□□□□□ -1.33
SCFD1-205ENST00000469043 LINC00116Q8NCU8 138 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms