RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 DDAH1O94760 285 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 BMP3P12645 472 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 OSBPP22059 807 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 SLC1A4P43007 532 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 FGD1P98174 961 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 Q6ZUG5 572 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 CATIPQ7Z7H3 387 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 MAP3K14Q99558 947 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 SENP2Q9HC62 589 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 GPHNQ9NQX3 736 aaPredicted RBP18.72■□□□□ 0.59
GPC1-207ENST00000466624 PDRG1Q9NUG6 133 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 MYPNQ86TC9 1320 aa18.72■□□□□ 0.59
GPC1-207ENST00000466624 RAD21O60216 631 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 PLA2G6O60733 806 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 CALM1P0DP23 149 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 CALM2P0DP24 149 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 CALM3P0DP25 149 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 RCAN1P53805 252 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 EVCP57679 992 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 TROAPQ12815 778 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 FAM83BQ5T0W9 1011 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 GPATCH4Q5T3I0 446 aaKnown RBP18.71■□□□□ 0.59
GPC1-207ENST00000466624 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 ZNF654Q8IZM8 581 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 PARK7Q99497 189 aaKnown RBP18.71■□□□□ 0.59
GPC1-207ENST00000466624 SAGE1Q9NXZ1 904 aa18.71■□□□□ 0.59
GPC1-207ENST00000466624 IRX3P78415 501 aaPredicted RBP18.7■□□□□ 0.58
GPC1-207ENST00000466624 ZNF543Q08ER8 600 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 RABEP1Q15276 862 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 ASPRV1Q53RT3 343 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 LBX2Q6XYB7 198 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 GTF3C2Q8WUA4 911 aaPredicted RBP18.7■□□□□ 0.58
GPC1-207ENST00000466624 BRF1Q92994 677 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 TANGO6Q9C0B7 1094 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 ASCC2Q9H1I8 757 aaPredicted RBP18.7■□□□□ 0.58
GPC1-207ENST00000466624 FEM1BQ9UK73 627 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
GPC1-207ENST00000466624 CA12O43570 354 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 TOB2Q14106 344 aaPredicted RBP18.69■□□□□ 0.58
GPC1-207ENST00000466624 COG2Q14746 738 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 ANKRD1Q15327 319 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 TAF1CQ15572 869 aaPredicted RBP18.69■□□□□ 0.58
GPC1-207ENST00000466624 APOA5Q6Q788 366 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 SYNE3Q6ZMZ3 975 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 FAM160B2Q86V87 743 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 NUP88Q99567 741 aaPredicted RBP18.69■□□□□ 0.58
GPC1-207ENST00000466624 WBP1LQ9NX94 342 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 RNF186Q9NXI6 227 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 HOXC10Q9NYD6 342 aa18.69■□□□□ 0.58
GPC1-207ENST00000466624 COL11A1P12107 1806 aaPredicted RBP18.69■□□□□ 0.58
GPC1-207ENST00000466624 FLOT1O75955 427 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 PARP1P09874 1014 aaKnown RBP18.68■□□□□ 0.58
GPC1-207ENST00000466624 NEK4P51957 841 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 STAT2P52630 851 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 GRM4Q14833 912 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 CCDC96Q2M329 555 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 BTNL9Q6UXG8 535 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 RASGRP2Q7LDG7 609 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 CHURC1Q8WUH1 139 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 ZFYVE28Q9HCC9 887 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 CEP350Q5VT06 3117 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 ADGRA2Q96PE1 1338 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 NID2Q14112 1375 aa18.68■□□□□ 0.58
GPC1-207ENST00000466624 KLF18A0A0U1RQI7 1052 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 TMEM232C9JQI7 657 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 DSG3P32926 999 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 GCLCP48506 637 aaPredicted RBP18.67■□□□□ 0.58
GPC1-207ENST00000466624 HERVK_113P62684 666 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 PPP2R5BQ15173 497 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 KCTD1Q719H9 257 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 PRPF38AQ8NAV1 312 aaKnown RBP18.67■□□□□ 0.58
GPC1-207ENST00000466624 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
GPC1-207ENST00000466624 SLF1Q9BQI6 1058 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 BEGAINQ9BUH8 593 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 MAD2L2Q9UI95 211 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 MTMR7Q9Y216 660 aa18.67■□□□□ 0.58
GPC1-207ENST00000466624 PALM3A6NDB9 673 aaPredicted RBP18.66■□□□□ 0.58
GPC1-207ENST00000466624 SPDYE16A6NNV3 312 aaPredicted RBP18.66■□□□□ 0.58
GPC1-207ENST00000466624 ZBTB43O43298 467 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 TLR2O60603 784 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 FDX1P10109 184 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 CYP2C8P10632 490 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 KIF5BP33176 963 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 APOBRQ0VD83 1088 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 CRHR2Q13324 411 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 MB21D1Q8N884 522 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
GPC1-207ENST00000466624 P2RX7Q99572 595 aaKnown RBP18.66■□□□□ 0.58
GPC1-207ENST00000466624 ADAMTS5Q9UNA0 930 aa18.66■□□□□ 0.58
GPC1-207ENST00000466624 MYH6P13533 1939 aa18.65■□□□□ 0.58
GPC1-207ENST00000466624 TRPA1O75762 1119 aa18.65■□□□□ 0.58
GPC1-207ENST00000466624 AK2P54819 239 aa18.65■□□□□ 0.58
GPC1-207ENST00000466624 NOM1Q5C9Z4 860 aaKnown RBP18.65■□□□□ 0.58
GPC1-207ENST00000466624 NUP133Q8WUM0 1156 aa18.65■□□□□ 0.58
GPC1-207ENST00000466624 ZNF274Q96GC6 653 aaPredicted RBP18.65■□□□□ 0.58
GPC1-207ENST00000466624 MYL10Q9BUA6 226 aa18.65■□□□□ 0.58
GPC1-207ENST00000466624 FBXO28Q9NVF7 368 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms