RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ADD3Q9UEY8 706 aaKnown RBP19.2■□□□□ 0.66
ACTB-207ENST00000462494 BLIDQ8IZY5 108 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 SRRTQ9BXP5 876 aaKnown RBP19.19■□□□□ 0.66
ACTB-207ENST00000462494 GTPBP4Q9BZE4 634 aaKnown RBP19.19■□□□□ 0.66
ACTB-207ENST00000462494 MKNK2Q9HBH9 465 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 IL17RBQ9NRM6 502 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 ZNF446Q9NWS9 450 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 H2AFXP16104 143 aaPredicted RBP19.19■□□□□ 0.66
ACTB-207ENST00000462494 CALML3P27482 149 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 PDXDC2PQ6P474 469 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 KRT222Q8N1A0 295 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 PANX2Q96RD6 677 aa19.19■□□□□ 0.66
ACTB-207ENST00000462494 LAMB1P07942 1786 aa19.18■□□□□ 0.66
ACTB-207ENST00000462494 LDHBP07195 334 aaKnown RBP19.18■□□□□ 0.66
ACTB-207ENST00000462494 PIP4K2BP78356 416 aa19.18■□□□□ 0.66
ACTB-207ENST00000462494 UTP14CQ5TAP6 766 aaKnown RBP19.18■□□□□ 0.66
ACTB-207ENST00000462494 SH3RF3Q8TEJ3 882 aaPredicted RBP19.18■□□□□ 0.66
ACTB-207ENST00000462494 PKNOX2Q96KN3 472 aa19.18■□□□□ 0.66
ACTB-207ENST00000462494 MTRQ99707 1265 aa19.18■□□□□ 0.66
ACTB-207ENST00000462494 FAM205AQ6ZU69 1335 aa19.18■□□□□ 0.66
ACTB-207ENST00000462494 USP17L3A6NCW0 530 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 USP17L4A6NCW7 530 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 CLCN6P51797 869 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 C12orf60Q5U649 245 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 USP17L1Q7RTZ2 530 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 ZHX1Q9UKY1 873 aaPredicted RBP19.17■□□□□ 0.66
ACTB-207ENST00000462494 MAPK8IP1Q9UQF2 711 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 GTPBP6O43824 516 aaPredicted RBP19.17■□□□□ 0.66
ACTB-207ENST00000462494 CCDC175P0C221 793 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 TM4SF1P30408 202 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 CASP14P31944 242 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 DIXDC1Q155Q3 683 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 PYM1Q9BRP8 204 aaKnown RBP19.17■□□□□ 0.66
ACTB-207ENST00000462494 MRPL44Q9H9J2 332 aaKnown RBP19.17■□□□□ 0.66
ACTB-207ENST00000462494 LZTFL1Q9NQ48 299 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 PCDHA4Q9UN74 947 aa19.17■□□□□ 0.66
ACTB-207ENST00000462494 TADA3O75528 432 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 TSPY3P0CV98 308 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 TSPY8P0CW00 308 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 TXLNAP40222 546 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 AMIGO3Q86WK7 504 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 DGKHQ86XP1 1220 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 RASSF8Q8NHQ8 419 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 RTCBQ9Y3I0 505 aaKnown RBP19.16■□□□□ 0.66
ACTB-207ENST00000462494 KIAA1551Q9HCM1 1747 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 CCDC88AQ3V6T2 1871 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 PBX1P40424 430 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 STAT6P42226 847 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 RAD9BQ6WBX8 426 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 TGFBRAP1Q8WUH2 860 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 IRX2Q9BZI1 471 aaPredicted RBP19.16■□□□□ 0.66
ACTB-207ENST00000462494 VPS16Q9H269 839 aa19.16■□□□□ 0.66
ACTB-207ENST00000462494 CCDC194A0A1B0GVG4 234 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 EFCAB8A8MWE9 144 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 N4BP3O15049 544 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 RPN1P04843 607 aaKnown RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 LONP1P36776 959 aaKnown RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 PAK1Q13153 545 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 KRT31Q15323 416 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 FAM182BQ5T319 152 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 RC3H1Q5TC82 1133 aaKnown RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 ARL6IP4Q66PJ3 421 aaKnown RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 TYW1BQ6NUM6 668 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 HEATR3Q7Z4Q2 680 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 AMOTL1Q8IY63 956 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 SLC44A5Q8NCS7 719 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 CCDC12Q8WUD4 166 aaPredicted RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 NELFBQ8WX92 580 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 ARHGEF1Q92888 912 aaKnown RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 GPR101Q96P66 508 aaPredicted RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 STX8Q9UNK0 236 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 RGL2O15211 777 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 MFAP3LO75121 409 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 MAP3K9P80192 1104 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 GRIK5Q16478 980 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 ZNF444Q8N0Y2 327 aaPredicted RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 C4orf32Q8N8J7 132 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 KIFC2Q96AC6 838 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 NAA15Q9BXJ9 866 aaKnown RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 SAP30BPQ9UHR5 308 aaKnown RBP19.15■□□□□ 0.66
ACTB-207ENST00000462494 MAD2L2Q9UI95 211 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 RWDD2AQ9UIY3 292 aa19.15■□□□□ 0.66
ACTB-207ENST00000462494 TPM1P09493 284 aa19.14■□□□□ 0.65
ACTB-207ENST00000462494 PPP2R3AQ06190 1150 aa19.14■□□□□ 0.65
ACTB-207ENST00000462494 WDR66Q8TBY9 1149 aa19.14■□□□□ 0.65
ACTB-207ENST00000462494 EPC1Q9H2F5 836 aa19.14■□□□□ 0.65
ACTB-207ENST00000462494 SH3GLB2Q9NR46 395 aa19.14■□□□□ 0.65
ACTB-207ENST00000462494 ARGLU1Q9NWB6 273 aaPredicted RBP19.14■□□□□ 0.65
ACTB-207ENST00000462494 MKRN1Q9UHC7 482 aaKnown RBP19.14■□□□□ 0.65
ACTB-207ENST00000462494 GDAQ9Y2T3 454 aa19.14■□□□□ 0.65
ACTB-207ENST00000462494 A0A0U1RQJ8 604 aa19.13■□□□□ 0.65
ACTB-207ENST00000462494 GYPCP04921 128 aa19.13■□□□□ 0.65
ACTB-207ENST00000462494 FXR1P51114 621 aaKnown RBP eCLIP19.13■□□□□ 0.653e-14■■□□□ 11.8
ACTB-207ENST00000462494 BMS1Q14692 1282 aaKnown RBP19.13■□□□□ 0.65
ACTB-207ENST00000462494 GRM4Q14833 912 aa19.13■□□□□ 0.65
ACTB-207ENST00000462494 ZNF658Q5TYW1 1059 aaPredicted RBP19.13■□□□□ 0.65
ACTB-207ENST00000462494 WWC2Q6AWC2 1192 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms